RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SYNRGQ9UMZ2 1314 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 MOXD2PA6NHM9 499 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 FIBPO43427 364 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 ZBED4O75132 1171 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 TIMP1P01033 207 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 CDK7P50613 346 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 NPY5RQ15761 445 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 KCNA10Q16322 511 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 USH1GQ495M9 461 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
SEC13-209ENST00000397117 GLT8D2Q9H1C3 349 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 STARD7Q9NQZ5 370 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
SEC13-209ENST00000397117 TBX21Q9UL17 535 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
SEC13-209ENST00000397117 FDX1P10109 184 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 DNAJB2P25686 324 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 MRPL12P52815 198 aaKnown RBP15.09■□□□□ 0.01
SEC13-209ENST00000397117 NBR1Q14596 966 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 C16orf59Q7L2K0 433 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 CUL5Q93034 780 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.014e-14■■□□□ 12.8
SEC13-209ENST00000397117 TEX13BQ9BXU2 312 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 PSTPIP2Q9H939 334 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
SEC13-209ENST00000397117 CCDC194A0A1B0GVG4 234 aa15.08■□□□□ 0
SEC13-209ENST00000397117 DUSP11O75319 330 aaKnown RBP15.08■□□□□ 0
SEC13-209ENST00000397117 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
SEC13-209ENST00000397117 CEBPZQ03701 1054 aaKnown RBP15.08■□□□□ 0
SEC13-209ENST00000397117 RILPL1Q5EBL4 403 aa15.08■□□□□ 0
SEC13-209ENST00000397117 MFSD5Q6N075 450 aa15.08■□□□□ 0
SEC13-209ENST00000397117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
SEC13-209ENST00000397117 ZNF467Q7Z7K2 595 aaPredicted RBP15.08■□□□□ 0
SEC13-209ENST00000397117 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
SEC13-209ENST00000397117 SPATA32Q96LK8 384 aa15.08■□□□□ 0
SEC13-209ENST00000397117 ZNF576Q9H609 170 aa15.08■□□□□ 0
SEC13-209ENST00000397117 GDPD2Q9HCC8 539 aa15.08■□□□□ 0
SEC13-209ENST00000397117 PNMA2Q9UL42 364 aa15.08■□□□□ 0
SEC13-209ENST00000397117 NOL7Q9UMY1 257 aaKnown RBP15.08■□□□□ 0
SEC13-209ENST00000397117 NCOR1O75376 2440 aa15.08■□□□□ 0
SEC13-209ENST00000397117 ELP1O95163 1332 aa15.08■□□□□ 0
SEC13-209ENST00000397117 MYADML2A6NDP7 307 aa15.07■□□□□ 0
SEC13-209ENST00000397117 ATP2A1O14983 1001 aa15.07■□□□□ 0
SEC13-209ENST00000397117 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
SEC13-209ENST00000397117 ICAM1P05362 532 aa15.07■□□□□ 0
SEC13-209ENST00000397117 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
SEC13-209ENST00000397117 TMEM240Q5SV17 173 aa15.07■□□□□ 0
SEC13-209ENST00000397117 RASIP1Q5U651 963 aa15.07■□□□□ 0
SEC13-209ENST00000397117 SNRNP48Q6IEG0 339 aaKnown RBP15.07■□□□□ 0
SEC13-209ENST00000397117 PIK3AP1Q6ZUJ8 805 aa15.07■□□□□ 0
SEC13-209ENST00000397117 SLC38A10Q9HBR0 1119 aa15.07■□□□□ 0
SEC13-209ENST00000397117 CCPG1Q9ULG6 757 aa15.07■□□□□ 0
SEC13-209ENST00000397117 PCDHA6Q9UN73 950 aa15.07■□□□□ 0
SEC13-209ENST00000397117 PCDHA8Q9Y5H6 950 aa15.07■□□□□ 0
SEC13-209ENST00000397117 ADCY6O43306 1168 aa15.06■□□□□ 0
SEC13-209ENST00000397117 ACVR2BQ13705 512 aa15.06■□□□□ 0
SEC13-209ENST00000397117 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
SEC13-209ENST00000397117 RASGRP4Q8TDF6 673 aa15.06■□□□□ 0
SEC13-209ENST00000397117 TNFRSF25Q93038 417 aa15.06■□□□□ 0
SEC13-209ENST00000397117 TIFAQ96CG3 184 aa15.06■□□□□ 0
SEC13-209ENST00000397117 FGD4Q96M96 766 aa15.06■□□□□ 0
SEC13-209ENST00000397117 USP28Q96RU2 1077 aa15.06■□□□□ 0
SEC13-209ENST00000397117 UPF3AQ9H1J1 476 aaKnown RBP15.06■□□□□ 0
SEC13-209ENST00000397117 MRPL11Q9Y3B7 192 aaKnown RBP15.06■□□□□ 0
SEC13-209ENST00000397117 ABCB11O95342 1321 aa15.06■□□□□ 0
SEC13-209ENST00000397117 GJA9P57773 515 aa15.06■□□□□ 0
SEC13-209ENST00000397117 STK38Q15208 465 aa15.06■□□□□ 0
SEC13-209ENST00000397117 TJAP1Q5JTD0 557 aa15.06■□□□□ 0
SEC13-209ENST00000397117 CPXCR1Q8N123 301 aa15.06■□□□□ 0
SEC13-209ENST00000397117 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
SEC13-209ENST00000397117 LEO1Q8WVC0 666 aaPredicted RBP15.06■□□□□ 0
SEC13-209ENST00000397117 GLT1D1Q96MS3 346 aa15.06■□□□□ 0
SEC13-209ENST00000397117 POLR3EQ9NVU0 708 aa15.06■□□□□ 0
SEC13-209ENST00000397117 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
SEC13-209ENST00000397117 RTEL1Q9NZ71 1219 aa15.06■□□□□ 0
SEC13-209ENST00000397117 ZHX1Q9UKY1 873 aaPredicted RBP15.06■□□□□ 0
SEC13-209ENST00000397117 MROH7Q68CQ1 1323 aa15.05■□□□□ 0
SEC13-209ENST00000397117 M0R2N6 131 aa15.05■□□□□ -0
SEC13-209ENST00000397117 ADAMTS3O15072 1205 aa15.05■□□□□ -0
SEC13-209ENST00000397117 ASGR1P07306 291 aa15.05■□□□□ -0
SEC13-209ENST00000397117 ATP2B1P20020 1258 aa15.05■□□□□ -0
SEC13-209ENST00000397117 TRAPPC10P48553 1259 aa15.05■□□□□ -0
SEC13-209ENST00000397117 NKX3-2P78367 333 aa15.05■□□□□ -0
SEC13-209ENST00000397117 PPIGQ13427 754 aaKnown RBP eCLIP15.05■□□□□ -0
SEC13-209ENST00000397117 JAKMIP3Q5VZ66 844 aa15.05■□□□□ -0
SEC13-209ENST00000397117 PCSK9Q8NBP7 692 aaKnown RBP15.05■□□□□ -0
SEC13-209ENST00000397117 AGBL1Q96MI9 1066 aa15.05■□□□□ -0
SEC13-209ENST00000397117 FTOQ9C0B1 505 aaKnown RBP eCLIP15.05■□□□□ -0
SEC13-209ENST00000397117 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
SEC13-209ENST00000397117 RAVER2Q9HCJ3 691 aaKnown RBP15.05■□□□□ -0
SEC13-209ENST00000397117 CLIC4Q9Y696 253 aa15.05■□□□□ -0
SEC13-209ENST00000397117 GOLGA6L4A6NEF3 574 aa15.04■□□□□ -0
SEC13-209ENST00000397117 FAM205CA6NFA0 338 aa15.04■□□□□ -0
SEC13-209ENST00000397117 GRXCR1A8MXD5 290 aa15.04■□□□□ -0
SEC13-209ENST00000397117 ARVCFO00192 962 aa15.04■□□□□ -0
SEC13-209ENST00000397117 CTAGE5O15320 804 aa15.04■□□□□ -0
SEC13-209ENST00000397117 C6orf222P0C671 652 aaPredicted RBP15.04■□□□□ -0
SEC13-209ENST00000397117 CSF2RAP15509 400 aa15.04■□□□□ -0
SEC13-209ENST00000397117 PBX2P40425 430 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms