RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CELF3Q5SZQ8 465 aaKnown RBP16.7■□□□□ 0.26
SEC13-208ENST00000397109 NFRKBQ6P4R8 1299 aa16.7■□□□□ 0.26
SEC13-208ENST00000397109 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
SEC13-208ENST00000397109 RIC8AQ9NPQ8 531 aa16.7■□□□□ 0.26
SEC13-208ENST00000397109 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
SEC13-208ENST00000397109 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 FIBPO43427 364 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 GGPS1O95749 300 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 FOSP01100 380 aaPredicted RBP16.69■□□□□ 0.26
SEC13-208ENST00000397109 PDIA3P30101 505 aaKnown RBP16.69■□□□□ 0.26
SEC13-208ENST00000397109 FPGSQ05932 587 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 NEDD9Q14511 834 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 PFKFB3Q16875 520 aaPredicted RBP16.69■□□□□ 0.26
SEC13-208ENST00000397109 NBPF20Q3BBV1 942 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 MFSD5Q6N075 450 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
SEC13-208ENST00000397109 STXBP3O00186 592 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 PRPF3O43395 683 aaKnown RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 B4GALT4O60513 344 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 PPFIA4O75335 1185 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 SCG2P13521 617 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 UBA1P22314 1058 aaKnown RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 ADCY7P51828 1080 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 UBE2SQ16763 222 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 TMEM199Q8N511 208 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 CDHR1Q96JP9 859 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 KATNAL1Q9BW62 490 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
SEC13-208ENST00000397109 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
SEC13-208ENST00000397109 SMCO2A6NFE2 343 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
SEC13-208ENST00000397109 IFNAR1P17181 557 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 SP2Q02086 613 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 PPIGQ13427 754 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC13-208ENST00000397109 FAM47CQ5HY64 1035 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
SEC13-208ENST00000397109 GPRASP2Q96D09 838 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 RNF26Q9BY78 433 aaPredicted RBP16.67■□□□□ 0.26
SEC13-208ENST00000397109 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 AP3B2Q13367 1082 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 NTRK3Q16288 839 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 MCTP2Q6DN12 878 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 TYW1BQ6NUM6 668 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 METTL7BQ6UX53 244 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 SESTD1Q86VW0 696 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 IL27Q8NEV9 243 aa16.67■□□□□ 0.26
SEC13-208ENST00000397109 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 MAFGO15525 162 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 CCT2P78371 535 aaKnown RBP16.66■□□□□ 0.26
SEC13-208ENST00000397109 SEMA3FQ13275 785 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 SHHQ15465 462 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 HSDL1Q3SXM5 330 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 CPLX2Q6PUV4 134 aaKnown RBP16.66■□□□□ 0.26
SEC13-208ENST00000397109 KAT2BQ92831 832 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 KIF2CQ99661 725 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
SEC13-208ENST00000397109 PPP1R12CQ9BZL4 782 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
SEC13-208ENST00000397109 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
SEC13-208ENST00000397109 CPLX1O14810 134 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 F2P00734 622 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 PSEN2P49810 448 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 PKN1Q16512 942 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 PHKBQ93100 1093 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
SEC13-208ENST00000397109 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
SEC13-208ENST00000397109 SOX1O00570 391 aaPredicted RBP16.64■□□□□ 0.25
SEC13-208ENST00000397109 SORBS3O60504 671 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 GNA11P29992 359 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 CYP2C18P33260 490 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 CLK2P49760 499 aaKnown RBP16.64■□□□□ 0.25
SEC13-208ENST00000397109 MFSD10Q14728 455 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 ANO3Q9BYT9 981 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 ZMYND12Q9H0C1 365 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
SEC13-208ENST00000397109 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
SEC13-208ENST00000397109 HAS3O00219 553 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
SEC13-208ENST00000397109 CSF2RAP15509 400 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms