RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 VSTM4Q8IW00 320 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 IDI2Q9BXS1 227 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 IPO5O00410 1097 aaKnown RBP16.82■□□□□ 0.28
MCF2L-205ENST00000397017 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-205ENST00000397017 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 ACRBPQ8NEB7 543 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 IVNS1ABPQ9Y6Y0 642 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 IGBP1P78318 339 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 CBX1P83916 185 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
MCF2L-205ENST00000397017 CCNE1P24864 410 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 MARK3P27448 753 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 USP14P54578 494 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 CYP27A1Q02318 531 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 MTF1Q14872 753 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 PRIMPOLQ96LW4 560 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
MCF2L-205ENST00000397017 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 STK17AQ9UEE5 414 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 NFIBO00712 420 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 POLR2FP61218 127 aaKnown RBP16.81■□□□□ 0.28
MCF2L-205ENST00000397017 TGFB2P61812 414 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 MTMR1Q13613 665 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-205ENST00000397017 RWDD2AQ9UIY3 292 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 PHACTR2O75167 634 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 AP3B2Q13367 1082 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 TCP11X2Q5H9J9 407 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 RAD54LQ92698 747 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-205ENST00000397017 PPP2R2CQ9Y2T4 447 aa16.81■□□□□ 0.28
MCF2L-205ENST00000397017 FGRP09769 529 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 VPS36Q86VN1 386 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 OR8K1Q8NGG5 319 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 PLCH1Q4KWH8 1693 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 BIRC3Q13489 604 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 IL17AQ16552 155 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 ANKRD40Q6AI12 368 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 PURBQ96QR8 312 aaKnown RBP16.8■□□□□ 0.28
MCF2L-205ENST00000397017 SEPT9Q9UHD8 586 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-205ENST00000397017 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 GLI3P10071 1580 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 RHOXF2BP0C7M4 288 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 CEP55Q53EZ4 464 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 METTL13Q8N6R0 699 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 RHOXF2Q9BQY4 288 aa16.8■□□□□ 0.28
MCF2L-205ENST00000397017 VIL1P09327 827 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 GRIPAP1Q4V328 841 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 SHISA4Q96DD7 197 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 GOLGA8IPA6NC78 632 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 GOLGA8JA6NMD2 632 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 GABPAQ06546 454 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 COASYQ13057 564 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 SARM1Q6SZW1 724 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 EIF2AK1Q9BQI3 630 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 GTPBP4Q9BZE4 634 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 TMEM110-MUSTN1A8MSY1 372 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 DLATP10515 647 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 BMP6P22004 513 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 NT5C2P49902 561 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 DNM2P50570 870 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 CYP26C1Q6V0L0 522 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 TAF4BQ92750 862 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 EHD4Q9H223 541 aa16.79■□□□□ 0.28
MCF2L-205ENST00000397017 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
MCF2L-205ENST00000397017 ZNF280CQ8ND82 737 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 RGS17Q9UGC6 210 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 PEX10O60683 326 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 SMTNP53814 917 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 DHTKD1Q96HY7 919 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 LRRIQ4A6NIV6 560 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 PPP1R11O60927 126 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 RPS6P62753 249 aaKnown RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 FKBP3Q00688 224 aaKnown RBP16.78■□□□□ 0.28
MCF2L-205ENST00000397017 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
MCF2L-205ENST00000397017 TMX2Q9Y320 296 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms