RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 C6orf222P0C671 652 aaPredicted RBP21.87■■□□□ 1.09
HOXA9-202ENST00000396345 NR5A1Q13285 461 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 LRRC41Q15345 812 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 CEP55Q53EZ4 464 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 RNF180Q86T96 592 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 OR6J1Q8NGC5 347 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 CDHR1Q96JP9 859 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 JADE2Q9NQC1 790 aa21.87■■□□□ 1.09
HOXA9-202ENST00000396345 GH1P01241 217 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 USP11P51784 963 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 SP2Q02086 613 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 SEMA3FQ13275 785 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 MTMR1Q13613 665 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 PIK3AP1Q6ZUJ8 805 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 CYP2W1Q8TAV3 490 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 TNFRSF25Q93038 417 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 FOXD4L1Q9NU39 408 aa21.86■■□□□ 1.09
HOXA9-202ENST00000396345 DNM1LO00429 736 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 MEIS1O00470 390 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 MAFGO15525 162 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 FARP2O94887 1054 aaPredicted RBP21.85■■□□□ 1.09
HOXA9-202ENST00000396345 UBA1P22314 1058 aaKnown RBP21.85■■□□□ 1.09
HOXA9-202ENST00000396345 INF2Q27J81 1249 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 LARP1BQ659C4 914 aaKnown RBP21.85■■□□□ 1.09
HOXA9-202ENST00000396345 NIPA1Q7RTP0 329 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 KLHDC9Q8NEP7 349 aa21.85■■□□□ 1.09
HOXA9-202ENST00000396345 BRCA2P51587 3418 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 MYADML2A6NDP7 307 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 KBTBD13C9JR72 458 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 FAM86B1E9PN63 330 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 H3BQV1 296 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 GGPS1O95749 300 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 FAM86B2P0C5J1 330 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 CIITAP33076 1130 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 MNX1P50219 401 aaPredicted RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 NKX3-2P78367 333 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 IRX5P78411 483 aaPredicted RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 ARHGAP1Q07960 439 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 GNL2Q13823 731 aaKnown RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 FSCN1Q16658 493 aaKnown RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 EARS2Q5JPH6 523 aaKnown RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 GNASQ5JWF2 1037 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 PLA2G4DQ86XP0 818 aa21.84■■□□□ 1.09
HOXA9-202ENST00000396345 DHX37Q8IY37 1157 aaKnown RBP21.84■■□□□ 1.09
HOXA9-202ENST00000396345 CTAGE5O15320 804 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 EDIL3O43854 480 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 HSP90AA1P07900 732 aaKnown RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 ARP10275 920 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 CST5P28325 142 aaPredicted RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 BEX3Q00994 111 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 LAMC2Q13753 1193 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 NEDD9Q14511 834 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 CELF3Q5SZQ8 465 aaKnown RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 DIS3LQ8TF46 1054 aaKnown RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 SENP7Q9BQF6 1050 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 TSEN34Q9BSV6 310 aaKnown RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 FOXP1Q9H334 677 aaPredicted RBP21.83■■□□□ 1.09
HOXA9-202ENST00000396345 KCNH7Q9NS40 1196 aa21.83■■□□□ 1.09
HOXA9-202ENST00000396345 IGLV3-22A0A075B6J6 115 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 FAM205CA6NFA0 338 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 SORBS3O60504 671 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 ATP9AO75110 1047 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 CPT1AP50416 773 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 KCNA10Q16322 511 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 PRR16Q569H4 304 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 BRDTQ58F21 947 aaPredicted RBP21.82■■□□□ 1.08
HOXA9-202ENST00000396345 MYSM1Q5VVJ2 828 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 NEK8Q86SG6 692 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 PCSK9Q8NBP7 692 aaKnown RBP21.82■■□□□ 1.08
HOXA9-202ENST00000396345 GIMAP8Q8ND71 665 aaPredicted RBP21.82■■□□□ 1.08
HOXA9-202ENST00000396345 EMID1Q96A84 441 aaPredicted RBP21.82■■□□□ 1.08
HOXA9-202ENST00000396345 PAWRQ96IZ0 340 aaKnown RBP21.82■■□□□ 1.08
HOXA9-202ENST00000396345 MLXIPQ9HAP2 919 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 PKD2L1Q9P0L9 805 aa21.82■■□□□ 1.08
HOXA9-202ENST00000396345 CYP3A7-CYP3A51PA0A087WV96 503 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 ZEB2O60315 1214 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 KCNA2P16389 499 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 PDCP20941 246 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 CYP3A7P24462 503 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 SETQ01105 290 aaPredicted RBP21.81■■□□□ 1.08
HOXA9-202ENST00000396345 LETM2Q2VYF4 491 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 CCSAPQ6IQ19 270 aaPredicted RBP21.81■■□□□ 1.08
HOXA9-202ENST00000396345 CYFIP1Q7L576 1253 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 NECAB2Q7Z6G3 386 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 AFG1LQ8WV93 481 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 BCAS3Q9H6U6 928 aa21.81■■□□□ 1.08
HOXA9-202ENST00000396345 AGO4Q9HCK5 861 aaKnown RBP21.81■■□□□ 1.08
HOXA9-202ENST00000396345 A6NJR5 290 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 MCTP1Q6DN14 999 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 MOXD1Q6UVY6 613 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 METTL7BQ6UX53 244 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 UBE2Q1Q7Z7E8 422 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 NOSTRINQ8IVI9 506 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 SPATA33Q96N06 139 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 C11orf49Q9H6J7 331 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 PHF24Q9UPV7 400 aa21.8■■□□□ 1.08
HOXA9-202ENST00000396345 DOCK5Q9H7D0 1870 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 MOXD2PA6NHM9 499 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 KIF28PB7ZC32 967 aa21.79■■□□□ 1.08
HOXA9-202ENST00000396345 TDP2O95551 362 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms