RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 CCDC122Q5T0U0 273 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 MYCT1Q8N699 235 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 HVCN1Q96D96 273 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 XPO4Q9C0E2 1151 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 ZDHHC9Q9Y397 364 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 UBE4BO95155 1302 aa3.73□□□□□ -1.81
VPS13C-203ENST00000395896 DDX60Q8IY21 1712 aaKnown RBP3.73□□□□□ -1.81
VPS13C-203ENST00000395896 POLR2AP24928 1970 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 KCNJ18B7U540 433 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 POLRMTO00411 1230 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RPA1P27694 616 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GTF2F1P35269 517 aaKnown RBP eCLIP3.72□□□□□ -1.815e-10■■■■□ 19.5
VPS13C-203ENST00000395896 KCNJ12Q14500 433 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 SLC4A8Q2Y0W8 1093 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 USH1GQ495M9 461 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CFAP221Q4G0U5 840 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RIOX1Q9H6W3 641 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DONSONQ9NYP3 566 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MYH7BA7E2Y1 1941 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MTMR1Q13613 665 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 NTRK3Q16288 839 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 NT5DC1Q5TFE4 455 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC94Q9BW85 323 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TRIM9Q9C026 710 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 VCPKMTQ9H867 229 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MRVI1Q9Y6F6 885 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 NEDD4P46934 1319 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 FAM237AA0A1B0GTK4 181 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DGAT1O75907 488 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 STXBP2Q15833 593 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RNF207Q6ZRF8 634 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ANKRD13AQ8IZ07 590 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC26Q8TAB7 109 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RMDN3Q96TC7 470 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 IFIH1Q9BYX4 1025 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 FANCLQ9NW38 375 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 OSBPP22059 807 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TFDP1Q14186 410 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GOLGA1Q92805 767 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CLEC11AQ9Y240 323 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PIK3CDO00329 1044 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 IPO5O00410 1097 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PLA2G6O60733 806 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GFPT2O94808 682 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GNAT1P11488 350 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ADAM9Q13443 819 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MYBPC2Q14324 1141 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ZC3H15Q8WU90 426 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GLG1Q92896 1179 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MKNK1Q9BUB5 465 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RTFDC1Q9BY42 306 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DNAI1Q9UI46 699 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 UQCRHLA0A096LP55 91 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TESPA1A2RU30 521 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 UQCRHP07919 91 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PSMC2P35998 433 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RASA3Q14644 834 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MSL1Q68DK7 614 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GPBP1Q86WP2 473 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 JRKLQ9Y4A0 524 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RASA1P20936 1047 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 QARSP47897 775 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 AP3M2P53677 418 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PANK4Q9NVE7 773 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 HNRNPDLO14979 420 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GPR162Q16538 588 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DPCR1Q3MIW9 517 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RUNDC3BQ96NL0 473 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MYOZ2Q9NPC6 264 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 BIN2Q9UBW5 565 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CLIC4Q9Y696 253 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 SPDYE2BA6NHP3 402 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 RHOBTB3O94955 611 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 SPDYE6P0CI01 402 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 FAM182BQ5T319 152 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC24Q8N4L8 307 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 EPB41L4AQ9HCS5 686 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ZBTB21Q9ULJ3 1066 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MICAL3Q7RTP6 2002 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PDXKO00764 312 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 KCNQ4P56696 695 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MORC3Q14149 939 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 COL23A1Q86Y22 540 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 MLXIPQ9HAP2 919 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 SEPT11Q9NVA2 429 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 PCDHA10Q9Y5I2 948 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 NHSQ6T4R5 1651 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GTPBP10A4D1E9 387 aaKnown RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC151A5D8V7 595 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 M0QZ92 97 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 SNAP23O00161 211 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 ZSCAN20P17040 1043 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 CTNNA2P26232 953 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 GBP2P32456 591 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-203ENST00000395896 FKBP1BP68106 108 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 KLHL30Q0D2K2 578 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 KIAA1524Q8TCG1 905 aa3.72□□□□□ -1.81
VPS13C-203ENST00000395896 TRIM6Q9C030 488 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms