RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 VSIG10LQ86VR7 867 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 ZNF577Q9BSK1 485 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 WDR11Q9BZH6 1224 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 JADE2Q9NQC1 790 aa23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 ADD3Q9UEY8 706 aaKnown RBP23.01■■□□□ 1.27
VCPKMT-202ENST00000395860 LRSAM1Q6UWE0 723 aa23■■□□□ 1.27
VCPKMT-202ENST00000395860 RBM43Q6ZSC3 357 aaKnown RBP23■■□□□ 1.27
VCPKMT-202ENST00000395860 IQUBQ8NA54 791 aa23■■□□□ 1.27
VCPKMT-202ENST00000395860 IWS1Q96ST2 819 aa23■■□□□ 1.27
VCPKMT-202ENST00000395860 USP25Q9UHP3 1055 aa23■■□□□ 1.27
VCPKMT-202ENST00000395860 ACTN4O43707 911 aaKnown RBP22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 ALDH5A1P51649 535 aaPredicted RBP22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 MTMR1Q13613 665 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 ZRSR1Q15695 479 aaKnown RBP22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 KRT79Q5XKE5 535 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 CYP4F22Q6NT55 531 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 CEP57L1Q8IYX8 460 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 FAM133AQ8N9E0 248 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 SLC5A5Q92911 643 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 CCDC34Q96HJ3 373 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 DISC1Q9NRI5 854 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 KCNH7Q9NS40 1196 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 HOOK1Q9UJC3 728 aaKnown RBP22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 PLXNA1Q9UIW2 1896 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 LRCH2Q5VUJ6 765 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 RRAGBQ5VZM2 374 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 KANK3Q6NY19 840 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 CALML4Q96GE6 196 aa22.99■■□□□ 1.27
VCPKMT-202ENST00000395860 STAM2O75886 525 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 SLFN14P0C7P3 912 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 STAT6P42226 847 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 E2F4Q16254 413 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 SNX29Q8TEQ0 813 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 MMTAG2Q9BU76 263 aaKnown RBP22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 CPA4Q9UI42 421 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 ADGRA2Q96PE1 1338 aa22.98■■□□□ 1.27
VCPKMT-202ENST00000395860 SOWAHBA6NEL2 793 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 IPO5O00410 1097 aaKnown RBP22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 GAS7O60861 476 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 PGK2P07205 417 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 SPIRE1Q08AE8 756 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 NCAPH2Q6IBW4 605 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 NLRX1Q86UT6 975 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 ELOA2Q8IYF1 753 aaPredicted RBP22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 CREBZFQ9NS37 354 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 VAV3Q9UKW4 847 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 ASTN1O14525 1302 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 LRRC37A2A6NM11 1700 aa22.97■■□□□ 1.27
VCPKMT-202ENST00000395860 B4DLN1 442 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 PSMD10O75832 226 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 TM4SF4P48230 202 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 STXBP2Q15833 593 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 DEFB115Q30KQ5 88 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 CDK5RAP3Q96JB5 506 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 PLIN2Q99541 437 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 MPHOSPH6Q99547 160 aaKnown RBP22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 TEKT3Q9BXF9 490 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 AGO4Q9HCK5 861 aaKnown RBP22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 PKD2L1Q9P0L9 805 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 IVNS1ABPQ9Y6Y0 642 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 DNAJC25-GNG10A0A024R161 153 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 APLP1P51693 650 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 ERMNQ8TAM6 284 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 ERCC4Q92889 916 aaPredicted RBP22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 GPRASP2Q96D09 838 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 ZIC5Q96T25 663 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 RIT2Q99578 217 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 ZFYVE28Q9HCC9 887 aa22.96■■□□□ 1.27
VCPKMT-202ENST00000395860 STRNO43815 780 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 PLCG1P19174 1290 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 GNPTABQ3T906 1256 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 SASS6Q6UVJ0 657 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 OTOP1Q7RTM1 612 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 INPP4AQ96PE3 977 aaPredicted RBP22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 NUDT12Q9BQG2 462 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 STK24Q9Y6E0 443 aa22.95■■□□□ 1.26
VCPKMT-202ENST00000395860 RASSF10A6NK89 507 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 FOXN1O15353 648 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 MAFGO15525 162 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 CCDC192P0DO97 292 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 MAPK4P31152 587 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 CCT6AP40227 531 aaKnown RBP22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 PDE4DQ08499 809 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 NOGQ13253 232 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 PPP2R5CQ13362 524 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 PNOCQ13519 176 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 POSTNQ15063 836 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 HAUS3Q68CZ6 603 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 PDXDC2PQ6P474 469 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 TSPY26PQ9H489 355 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 KIAA1468Q9P260 1216 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 KDM3AQ9Y4C1 1321 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 TLR2O60603 784 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 EIF3JO75822 258 aaKnown RBP22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 AFMP43652 599 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 GRB10Q13322 594 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 GPR142Q7Z601 462 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 ABRAQ8N0Z2 381 aa22.94■■□□□ 1.26
VCPKMT-202ENST00000395860 PAGE5Q96GU1 130 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms