RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 PGM5Q15124 567 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 ZNF365Q70YC5 407 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 RPUSD2Q8IZ73 545 aaKnown RBP10.15□□□□□ -0.78
PTPN20-205ENST00000395721 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 SMARCC2Q8TAQ2 1214 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 LRRC2Q9BYS8 371 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 TRMT13Q9NUP7 481 aaKnown RBP10.15□□□□□ -0.78
PTPN20-205ENST00000395721 DDX41Q9UJV9 622 aaKnown RBP10.15□□□□□ -0.78
PTPN20-205ENST00000395721 UMODL1Q5DID0 1318 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 TMEM265A0A087WTH1 108 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 KRT32Q14532 448 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 DGKDQ16760 1214 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 RAB11FIP4Q86YS3 637 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 IL31RAQ8NI17 732 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 NEK1Q96PY6 1258 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 KATNAL1Q9BW62 490 aa10.15□□□□□ -0.78
PTPN20-205ENST00000395721 BAZ2BQ9UIF8 2168 aaKnown RBP10.15□□□□□ -0.78
PTPN20-205ENST00000395721 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 FGBP02675 491 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 RXRAP19793 462 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 CBX1P83916 185 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 BFSP2Q13515 415 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 GNPTABQ3T906 1256 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 VSIG10LQ86VR7 867 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 MICU3Q86XE3 530 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 TNPO1Q92973 898 aaKnown RBP10.14□□□□□ -0.79
PTPN20-205ENST00000395721 TMEM51Q9NW97 253 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SCN10AQ9Y5Y9 1956 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 GGPS1O95749 300 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 PSEN2P49810 448 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-205ENST00000395721 WNT8AQ9H1J5 351 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 KIAA1217Q5T5P2 1943 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SORBS3O60504 671 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SRBD1Q8N5C6 995 aaKnown RBP10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SLC17A8Q8NDX2 589 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 PPTC7Q8NI37 304 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 PPP1R13LQ8WUF5 828 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 HERVK_113Q902F9 699 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SCLYQ96I15 445 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 GUCD1Q96NT3 240 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 CCDC94Q9BW85 323 aaPredicted RBP10.14□□□□□ -0.79
PTPN20-205ENST00000395721 SEMA6BQ9H3T3 888 aa10.14□□□□□ -0.79
PTPN20-205ENST00000395721 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 DYNC1I1O14576 645 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 STAM2O75886 525 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 PFKMP08237 780 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 DNAJB2P25686 324 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 CELF3Q5SZQ8 465 aaKnown RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 TMTC3Q6ZXV5 915 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 C16orf59Q7L2K0 433 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 MTERF4Q7Z6M4 381 aaKnown RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 TSC1Q92574 1164 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 SPATA33Q96N06 139 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 ALG1Q9BT22 464 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 MLXIPQ9HAP2 919 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 RBM28Q9NW13 759 aaKnown RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 MSRAQ9UJ68 235 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 TGFB3P10600 412 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 ACTN1P12814 892 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 UBA1P22314 1058 aaKnown RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 RFC2P35250 354 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 MFSD10Q14728 455 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 RAB30Q15771 203 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 PTGISQ16647 500 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 RTN1Q16799 776 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 DHX32Q7L7V1 743 aaKnown RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 SGMS1Q86VZ5 419 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 C7orf31Q8N865 590 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 FANCBQ8NB91 859 aa10.13□□□□□ -0.79
PTPN20-205ENST00000395721 ZFP91Q96JP5 570 aaPredicted RBP10.13□□□□□ -0.79
PTPN20-205ENST00000395721 FRMPD4Q14CM0 1322 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 ZBTB43O43298 467 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 ZNF286BP0CG31 522 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
PTPN20-205ENST00000395721 RASIP1Q5U651 963 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 XRRA1Q6P2D8 792 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 OTOP2Q7RTS6 562 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 HEATR3Q7Z4Q2 680 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 DEFB128Q7Z7B8 93 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 NLRX1Q86UT6 975 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 SESTD1Q86VW0 696 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 CMTR1Q8N1G2 835 aaKnown RBP10.12□□□□□ -0.79
PTPN20-205ENST00000395721 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 C22orf23Q9BZE7 217 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
PTPN20-205ENST00000395721 GOLGA8AA7E2F4 631 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 GOLGA8BA8MQT2 603 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 NOP56O00567 594 aaKnown RBP10.12□□□□□ -0.79
PTPN20-205ENST00000395721 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
PTPN20-205ENST00000395721 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 USP17L6PQ6QN14 398 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 KAT2BQ92831 832 aa10.12□□□□□ -0.79
PTPN20-205ENST00000395721 TCEANC2Q96MN5 208 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms