RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
SNCA-205ENST00000394991 MAF1Q9H063 256 aa18.52■□□□□ 0.56
SNCA-205ENST00000394991 QRICH1Q2TAL8 776 aa18.51■□□□□ 0.55
SNCA-205ENST00000394991 MCMDC2Q4G0Z9 681 aa18.51■□□□□ 0.55
SNCA-205ENST00000394991 MFSD6Q6ZSS7 791 aa18.51■□□□□ 0.55
SNCA-205ENST00000394991 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
SNCA-205ENST00000394991 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
SNCA-205ENST00000394991 EIF3JO75822 258 aaKnown RBP18.5■□□□□ 0.55
SNCA-205ENST00000394991 RGS20O76081 388 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 AMHP03971 560 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 NR3C2P08235 984 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 ALADP13716 330 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 NMIQ13287 307 aaPredicted RBP18.5■□□□□ 0.55
SNCA-205ENST00000394991 LAMC2Q13753 1193 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 EPC2Q52LR7 807 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 ARHGEF16Q5VV41 709 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 SERINC5Q86VE9 423 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
SNCA-205ENST00000394991 UIMC1Q96RL1 719 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 OSBPL7Q9BZF2 842 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 PXMP2Q9NR77 195 aa18.5■□□□□ 0.55
SNCA-205ENST00000394991 OPLAHO14841 1288 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 SORBS3O60504 671 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 PCP11498 1178 aaKnown RBP18.49■□□□□ 0.55
SNCA-205ENST00000394991 TIGD5Q53EQ6 642 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 PLEKHG4Q58EX7 1191 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 TCEAL5Q5H9L2 206 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 MCF2L2Q86YR7 1114 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 PNMA1Q8ND90 353 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 CCDC171Q6TFL3 1326 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
SNCA-205ENST00000394991 POTEB3A0JP26 581 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 RSPH10B2B2RC85 870 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 H3BNC9 293 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 DCXO43602 365 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 RSPH10BP0C881 870 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 THPOP40225 353 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 MRE11P49959 708 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 ZP2Q05996 745 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 COL19A1Q14993 1142 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 PTPROQ16827 1216 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 PUS10Q3MIT2 529 aaKnown RBP18.48■□□□□ 0.55
SNCA-205ENST00000394991 HSDL1Q3SXM5 330 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 MYSM1Q5VVJ2 828 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 POTEBQ6S5H4 581 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 FBXO11Q86XK2 927 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 DGKHQ86XP1 1220 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 BANK1Q8NDB2 785 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 PABPC5Q96DU9 382 aaKnown RBP18.48■□□□□ 0.55
SNCA-205ENST00000394991 SAMD11Q96NU1 681 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 CTNNA3Q9UI47 895 aa18.48■□□□□ 0.55
SNCA-205ENST00000394991 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
SNCA-205ENST00000394991 KAT6AQ92794 2004 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 TECTAO75443 2155 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 BAZ2BQ9UIF8 2168 aaKnown RBP18.47■□□□□ 0.55
SNCA-205ENST00000394991 CFBP00751 764 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 HSD17B4P51659 736 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 PDE1AP54750 535 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 NHLH1Q02575 133 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 GPM6BQ13491 265 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 CSPP1Q1MSJ5 1256 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 ESR2Q92731 530 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 C16orf70Q9BSU1 422 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
SNCA-205ENST00000394991 WDFY4Q6ZS81 3184 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 C5orf42Q9H799 3197 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.46■□□□□ 0.55
SNCA-205ENST00000394991 C19orf67A6NJJ6 358 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 PPFIA4O75335 1185 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 GGPS1O95749 300 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 HOXC8P31273 242 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 SP2Q02086 613 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 GHRHRQ02643 423 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 ASPRV1Q53RT3 343 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 CELF3Q5SZQ8 465 aaKnown RBP18.46■□□□□ 0.55
SNCA-205ENST00000394991 IL31RAQ8NI17 732 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 FBXL18Q96ME1 805 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 SPATA33Q96N06 139 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 YME1L1Q96TA2 773 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
SNCA-205ENST00000394991 KAT14Q9H8E8 782 aa18.46■□□□□ 0.55
SNCA-205ENST00000394991 KIAA1671Q9BY89 1806 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 KDM4AO75164 1064 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
SNCA-205ENST00000394991 UBA1P22314 1058 aaKnown RBP18.45■□□□□ 0.54
SNCA-205ENST00000394991 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 EP400NLQ6ZTU2 488 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 TMEM192Q8IY95 271 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 ANKS1AQ92625 1134 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 GPKOWQ92917 476 aaPredicted RBP eCLIP18.45■□□□□ 0.54
SNCA-205ENST00000394991 TOP1MTQ969P6 601 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 NSUN3Q9H649 340 aaKnown RBP18.45■□□□□ 0.54
SNCA-205ENST00000394991 VAT1LQ9HCJ6 419 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 TRIOO75962 3097 aa18.45■□□□□ 0.54
SNCA-205ENST00000394991 C17orf102A2RUQ5 167 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 TREHO43280 583 aa18.44■□□□□ 0.54
SNCA-205ENST00000394991 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
SNCA-205ENST00000394991 PPP1R11O60927 126 aaPredicted RBP18.44■□□□□ 0.54
SNCA-205ENST00000394991 UPP2O95045 317 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms