RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TRAF7Q6Q0C0 670 aa24.6■■□□□ 1.53
TRAF4-203ENST00000394925 STAG2Q8N3U4 1231 aa24.6■■□□□ 1.53
TRAF4-203ENST00000394925 TGS1Q96RS0 853 aaKnown RBP24.6■■□□□ 1.53
TRAF4-203ENST00000394925 AMNQ9BXJ7 453 aa24.6■■□□□ 1.53
TRAF4-203ENST00000394925 LINC01553A4QN01 128 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 OPLAHO14841 1288 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 HSD17B4P51659 736 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 MBTPS1Q14703 1052 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 UBAC1Q9BSL1 405 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 LRFN3Q9BTN0 628 aa24.59■■□□□ 1.53
TRAF4-203ENST00000394925 RGS20O76081 388 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 HIC1Q14526 733 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 IMMTQ16891 758 aaKnown RBP24.58■■□□□ 1.53
TRAF4-203ENST00000394925 HSDL1Q3SXM5 330 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 MYSM1Q5VVJ2 828 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 PLEKHM2Q8IWE5 1019 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 SPATA33Q96N06 139 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 PDCD2LQ9BRP1 358 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 KRT23Q9C075 422 aa24.58■■□□□ 1.53
TRAF4-203ENST00000394925 SIP14410 1827 aa24.57■■□□□ 1.52
TRAF4-203ENST00000394925 PPFIA4O75335 1185 aa24.57■■□□□ 1.52
TRAF4-203ENST00000394925 LGR5O75473 907 aa24.57■■□□□ 1.52
TRAF4-203ENST00000394925 CELF3Q5SZQ8 465 aaKnown RBP24.57■■□□□ 1.52
TRAF4-203ENST00000394925 IFIT1BQ5T764 474 aaKnown RBP24.57■■□□□ 1.52
TRAF4-203ENST00000394925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAF4-203ENST00000394925 KHSRPQ92945 711 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAF4-203ENST00000394925 DSCC1Q9BVC3 393 aa24.57■■□□□ 1.52
TRAF4-203ENST00000394925 KLRF2D3W0D1 207 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 PPP1R11O60927 126 aaPredicted RBP24.56■■□□□ 1.52
TRAF4-203ENST00000394925 GGPS1O95749 300 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 HOXD8P13378 290 aaPredicted RBP24.56■■□□□ 1.52
TRAF4-203ENST00000394925 HOXA13P31271 388 aaPredicted RBP24.56■■□□□ 1.52
TRAF4-203ENST00000394925 KCNV1Q6PIU1 500 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 STOX1Q6ZVD7 989 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 SMC5Q8IY18 1101 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 OSBPL3Q9H4L5 887 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 PCDHA1Q9Y5I3 950 aa24.56■■□□□ 1.52
TRAF4-203ENST00000394925 THPOP40225 353 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 SP2Q02086 613 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 GHRHRQ02643 423 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 PGM5Q15124 567 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 TMEM31Q5JXX7 168 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 VSIG10LQ86VR7 867 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 CHD1LQ86WJ1 897 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 DBF4BQ8NFT6 615 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 IL31RAQ8NI17 732 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 ZFP91Q96JP5 570 aaPredicted RBP24.55■■□□□ 1.52
TRAF4-203ENST00000394925 UBE2ZQ9H832 354 aaPredicted RBP24.55■■□□□ 1.52
TRAF4-203ENST00000394925 CNNM2Q9H8M5 875 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 CTNNA3Q9UI47 895 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 INSL6Q9Y581 213 aa24.55■■□□□ 1.52
TRAF4-203ENST00000394925 HIP1O00291 1037 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 ZBTB5O15062 677 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 SERINC5Q86VE9 423 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 MYOCDQ8IZQ8 938 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 MTMR8Q96EF0 704 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 C17orf80Q9BSJ5 609 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 RWDD1Q9H446 243 aaPredicted RBP24.54■■□□□ 1.52
TRAF4-203ENST00000394925 MAP3K20Q9NYL2 800 aaKnown RBP24.54■■□□□ 1.52
TRAF4-203ENST00000394925 MAD2L2Q9UI95 211 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 EMSYQ7Z589 1322 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 MICAL3Q7RTP6 2002 aa24.54■■□□□ 1.52
TRAF4-203ENST00000394925 BAZ2BQ9UIF8 2168 aaKnown RBP24.53■■□□□ 1.52
TRAF4-203ENST00000394925 RSPH10B2B2RC85 870 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 AMHP03971 560 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 RSPH10BP0C881 870 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 UBA1P22314 1058 aaKnown RBP24.53■■□□□ 1.52
TRAF4-203ENST00000394925 FBXO22Q8NEZ5 403 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 GPKOWQ92917 476 aaPredicted RBP eCLIP24.53■■□□□ 1.52
TRAF4-203ENST00000394925 C16orf70Q9BSU1 422 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 MLXIPQ9HAP2 919 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 CD320Q9NPF0 282 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 HCN4Q9Y3Q4 1203 aa24.53■■□□□ 1.52
TRAF4-203ENST00000394925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.52■■□□□ 1.52
TRAF4-203ENST00000394925 C17orf102A2RUQ5 167 aa24.52■■□□□ 1.52
TRAF4-203ENST00000394925 SEC23AQ15436 765 aa24.52■■□□□ 1.52
TRAF4-203ENST00000394925 FCHSD1Q86WN1 690 aa24.52■■□□□ 1.52
TRAF4-203ENST00000394925 HOMER1Q86YM7 354 aa24.52■■□□□ 1.52
TRAF4-203ENST00000394925 ATP6V0A1Q93050 837 aa24.52■■□□□ 1.52
TRAF4-203ENST00000394925 PALM3A6NDB9 673 aaPredicted RBP24.51■■□□□ 1.51
TRAF4-203ENST00000394925 FAM86C2PA6NEL3 165 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 TGFB3P10600 412 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 CCND2P30279 289 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 NUCB1Q02818 461 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 CYB5R4Q7L1T6 521 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 SAMD3Q8N6K7 520 aa24.51■■□□□ 1.51
TRAF4-203ENST00000394925 H3BRB1 525 aa24.5■■□□□ 1.51
TRAF4-203ENST00000394925 GCOM1H8Y6P7 765 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-203ENST00000394925 POLR2MP0CAP2 368 aa24.5■■□□□ 1.51
TRAF4-203ENST00000394925 KCNA5P22460 613 aa24.5■■□□□ 1.51
TRAF4-203ENST00000394925 HTRA4P83105 476 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-203ENST00000394925 MKRN4PQ13434 485 aaPredicted RBP24.5■■□□□ 1.51
TRAF4-203ENST00000394925 PLEKHG4Q58EX7 1191 aa24.5■■□□□ 1.51
TRAF4-203ENST00000394925 TUT1Q9H6E5 874 aaKnown RBP24.5■■□□□ 1.51
TRAF4-203ENST00000394925 BCAS3Q9H6U6 928 aa24.5■■□□□ 1.51
TRAF4-203ENST00000394925 TREHO43280 583 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 GPR37L1O60883 481 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 IGHDP01880 384 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 SMIM10L2AP0DMW4 78 aa24.49■■□□□ 1.51
TRAF4-203ENST00000394925 SMIM10L2BP0DMW5 78 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms