RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 APOA5Q6Q788 366 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 CCDC82Q8N4S0 544 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 SAMD3Q8N6K7 520 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 FANCBQ8NB91 859 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 INPP4AQ96PE3 977 aaPredicted RBP10.24□□□□□ -0.77
ATG4A-205ENST00000394892 NEK1Q96PY6 1258 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 C16orf70Q9BSU1 422 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 SEZ6LQ9BYH1 1024 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 PBX4Q9BYU1 374 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 THEGQ9P2T0 379 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 HDAC6Q9UBN7 1215 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 YBX2Q9Y2T7 364 aaKnown RBP10.24□□□□□ -0.77
ATG4A-205ENST00000394892 MRVI1Q9Y6F6 885 aa10.24□□□□□ -0.77
ATG4A-205ENST00000394892 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 CCDC69A6NI79 296 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 B4DLN1 442 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 SPATA31C2B4DYI2 1134 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 PIK3CDO00329 1044 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 KPNA6O60684 536 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 GGPS1O95749 300 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 F2P00734 622 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 COL9A1P20849 921 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 IGFBP4P22692 258 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 CDC27P30260 824 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 ICAM3P32942 547 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 PSEN2P49810 448 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 MRPL12P52815 198 aaKnown RBP10.23□□□□□ -0.77
ATG4A-205ENST00000394892 MRPS5P82675 430 aaKnown RBP10.23□□□□□ -0.77
ATG4A-205ENST00000394892 LAMC2Q13753 1193 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 UBE2SQ16763 222 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 FAM47CQ5HY64 1035 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 NFXL1Q6ZNB6 911 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 SESTD1Q86VW0 696 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 TMTC2Q8N394 836 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 PPTC7Q8NI37 304 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-205ENST00000394892 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
ATG4A-205ENST00000394892 ASB2Q96Q27 587 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 MPHOSPH6Q99547 160 aaKnown RBP10.23□□□□□ -0.77
ATG4A-205ENST00000394892 OSBPL7Q9BZF2 842 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 RTEL1Q9NZ71 1219 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 SNX14Q9Y5W7 946 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 CNTNAP5Q8WYK1 1306 aa10.23□□□□□ -0.77
ATG4A-205ENST00000394892 BAZ2BQ9UIF8 2168 aaKnown RBP10.22□□□□□ -0.77
ATG4A-205ENST00000394892 ATP9AO75110 1047 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 FGBP02675 491 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 MYOGP15173 224 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 ITGB5P18084 799 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 CCND2P30279 289 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 KIF5BP33176 963 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 RABGGTBP53611 331 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 CHMP4BP1P59074 171 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 PTPN11Q06124 597 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-205ENST00000394892 MBTPS1Q14703 1052 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 DGKDQ16760 1214 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 WWC2Q6AWC2 1192 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
ATG4A-205ENST00000394892 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
ATG4A-205ENST00000394892 USP38Q8NB14 1042 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 SPATA33Q96N06 139 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 LZTS2Q9BRK4 669 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 ALG1Q9BT22 464 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 PRDM12Q9H4Q4 367 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 GTF2IRD1Q9UHL9 959 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
ATG4A-205ENST00000394892 SPTBN5Q9NRC6 3674 aaKnown RBP10.21□□□□□ -0.77
ATG4A-205ENST00000394892 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 SUPT20HL2P0C7V6 817 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 TGFB3P10600 412 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.77
ATG4A-205ENST00000394892 HOXC8P31273 242 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 HSPA4P34932 840 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 GNAQP50148 359 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 RBL2Q08999 1139 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 ADGRE1Q14246 886 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 MFSD10Q14728 455 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 PTGISQ16647 500 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 KIAA0753Q2KHM9 967 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-205ENST00000394892 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 SPRED2Q7Z698 418 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 DEFB128Q7Z7B8 93 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 TRIM50Q86XT4 487 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 RPUSD2Q8IZ73 545 aaKnown RBP10.21□□□□□ -0.77
ATG4A-205ENST00000394892 ADAMTS19Q8TE59 1207 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
ATG4A-205ENST00000394892 CHD7Q9P2D1 2997 aa10.21□□□□□ -0.78
ATG4A-205ENST00000394892 UNC80Q8N2C7 3258 aa10.21□□□□□ -0.78
ATG4A-205ENST00000394892 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 NBNO60934 754 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 LGALS2P05162 132 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 KCNA2P16389 499 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
ATG4A-205ENST00000394892 APOBRQ0VD83 1088 aa10.2□□□□□ -0.78
ATG4A-205ENST00000394892 CCDC85BQ15834 202 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms