RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 HDAC7Q8WUI4 952 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.542e-13■■■■■ 158.6
ACTN1-203ENST00000394419 ARHGAP20Q9P2F6 1191 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
ACTN1-203ENST00000394419 TTLL1O95922 423 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 PPP1R2P41236 205 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 ATP1A2P50993 1020 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 FKBP3Q00688 224 aaKnown RBP11.65□□□□□ -0.55
ACTN1-203ENST00000394419 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.55
ACTN1-203ENST00000394419 GOLGA5Q8TBA6 731 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 MAGEF1Q9HAY2 307 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 MTMR4Q9NYA4 1195 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 PCDHB13Q9Y5F0 798 aa11.65□□□□□ -0.55
ACTN1-203ENST00000394419 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 HSF2BPO75031 334 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 TM4SF1P30408 202 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-203ENST00000394419 RAD54LQ92698 747 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 MAP2K7O14733 419 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 CETN3O15182 167 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 HNRNPLLQ8WVV9 542 aaKnown RBP11.64□□□□□ -0.55
ACTN1-203ENST00000394419 MMTAG2Q9BU76 263 aaKnown RBP11.64□□□□□ -0.55
ACTN1-203ENST00000394419 DBNDD1Q9H9R9 158 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 POLLQ9UGP5 575 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
ACTN1-203ENST00000394419 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 HYOU1Q9Y4L1 999 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 COL4A3BPQ9Y5P4 624 aa11.64□□□□□ -0.55
ACTN1-203ENST00000394419 ITGB4P16144 1822 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 TOM1O60784 492 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 GDF11O95390 407 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 TAL1P17542 331 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-203ENST00000394419 GUCY2DQ02846 1103 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 COASYQ13057 564 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 ZYXQ15942 572 aaKnown RBP11.63□□□□□ -0.55
ACTN1-203ENST00000394419 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 MAEAQ7L5Y9 396 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 TBC1D22AQ8WUA7 517 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 GOLPH3Q9H4A6 298 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 CLIC2O15247 247 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 IVLP07476 585 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 MYBL2P10244 700 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 PPP4CP60510 307 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 UBXN2AP68543 259 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 AMPD2Q01433 879 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 ODF2Q5BJF6 829 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 RDH13Q8NBN7 331 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 OSBPL9Q96SU4 736 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 MED4Q9NPJ6 270 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 CHD4Q14839 1912 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 NR2F2P24468 414 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-203ENST00000394419 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 SPATA4Q8NEY3 305 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 RPGRIP1Q96KN7 1286 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 KRT12Q99456 494 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
ACTN1-203ENST00000394419 PNMA6FA0A0J9YX94 578 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 KCNK3O14649 394 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 CEP104O60308 925 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 TBCAO75347 108 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 ASIC2Q16515 512 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 CFAP221Q4G0U5 840 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 SLC30A10Q6XR72 485 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 DAGLBQ8NCG7 672 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 JMJD4Q9H9V9 463 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 EPB41L5Q9HCM4 733 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 MYH14Q7Z406 1995 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 ZNF263O14978 683 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 PALMO75781 387 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 PRPF6O94906 941 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 GCNT3O95395 438 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 ACTN1P12814 892 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 TCP1P17987 556 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 USP8P40818 1118 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 ADAT2Q7Z6V5 191 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 GUF1Q8N442 669 aaKnown RBP11.62□□□□□ -0.55
ACTN1-203ENST00000394419 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
ACTN1-203ENST00000394419 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms