RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 CCDC89Q8N998 374 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 VPS37BQ9H9H4 285 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 CAPN9O14815 690 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 PRCPP42785 496 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 SPATA1Q5VX52 437 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 HDXQ7Z353 690 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 SAAL1Q96ER3 474 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 PSMD14O00487 310 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 TMEM191BP0C7N4 346 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 INTS5Q6P9B9 1019 aaKnown RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 GBP6Q6ZN66 633 aa9.98□□□□□ -0.81
CDH11-202ENST00000394156 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.98□□□□□ -0.81
CDH11-202ENST00000394156 MEGF6O75095 1541 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 PXDNQ92626 1479 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 SLC16A4O15374 487 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 HMGCS2P54868 508 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 MCF2L2Q86YR7 1114 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 CCDC26Q8TAB7 109 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 TSR3Q9UJK0 312 aaKnown RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 PDE6CP51160 858 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 NAA30Q147X3 362 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 KCTD19Q17RG1 926 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 SLC30A10Q6XR72 485 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 CEP57Q86XR8 500 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 OR8K1Q8NGG5 319 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 SSX2IPQ9Y2D8 614 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 PRPF3O43395 683 aaKnown RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 PPP6R2O75170 966 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 GRIN1Q05586 938 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 HS1BP3Q53T59 392 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 ZNF746Q6NUN9 644 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 RPAP1Q9BWH6 1393 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 NFX1Q12986 1120 aaKnown RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 TMC4Q7Z404 712 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 TXNRD3Q86VQ6 643 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 HSPH1Q92598 858 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 EPB41L4AQ9HCS5 686 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 PABPN1LA6NDY0 278 aaKnown RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 KLK7P49862 253 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 ZNF658Q5TYW1 1059 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 TMTC3Q6ZXV5 915 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 THNSL1Q8IYQ7 743 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 DDX12PQ92771 950 aa9.97□□□□□ -0.81
CDH11-202ENST00000394156 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
CDH11-202ENST00000394156 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH11-202ENST00000394156 STAM2O75886 525 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 LACTBP83111 547 aaPredicted RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 CUL4AQ13619 759 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 SWSAP1Q6NVH7 229 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 MIS18BP1Q6P0N0 1132 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 TMTC1Q8IUR5 882 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 TTC30BQ8N4P2 665 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 P2RX5Q93086 422 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 NSUN4Q96CB9 384 aaKnown RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 ZWILCHQ9H900 591 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 SAR1BQ9Y6B6 198 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 BNIP3LO60238 219 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 OSBPP22059 807 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 MTMR1Q13613 665 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 PPP2R5AQ15172 486 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 CCDC6Q16204 474 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 BRDTQ58F21 947 aaPredicted RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 MB21D2Q8IYB1 491 aaPredicted RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 THOC1Q96FV9 657 aaKnown RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 NUP58Q9BVL2 599 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 TBK1Q9UHD2 729 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 GFPT1Q06210 699 aaPredicted RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 NOP9Q86U38 636 aaKnown RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 MICALL2Q8IY33 904 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 C1orf112Q9NSG2 853 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 IMPACTQ9P2X3 320 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 CHORDC1Q9UHD1 332 aaPredicted RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 AMFRQ9UKV5 643 aa9.96□□□□□ -0.81
CDH11-202ENST00000394156 SRPRBQ9Y5M8 271 aaKnown RBP9.96□□□□□ -0.81
CDH11-202ENST00000394156 ARHGAP6O43182 974 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 RHPN2Q8IUC4 686 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 FMNL3Q8IVF7 1028 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 FAM186BQ8IYM0 893 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 RSAD2Q8WXG1 361 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 TTC14Q96N46 770 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 EPN1Q9Y6I3 576 aaPredicted RBP9.96□□□□□ -0.82
CDH11-202ENST00000394156 F5H6K3 240 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 OPA1O60313 960 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 TNNC2P02585 160 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 SLC8A3P57103 927 aa9.96□□□□□ -0.82
CDH11-202ENST00000394156 KLRC3Q07444 240 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms