RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 LINC00301Q8NCQ3 95 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 EDEM1Q92611 657 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 ANKS1AQ92625 1134 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MRIQ9BWK5 157 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 IDI2Q9BXS1 227 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 GOLPH3LQ9H4A5 285 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CABP5Q9NP86 173 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 HOMER2Q9NSB8 354 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 RTEL1Q9NZ71 1219 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 TMOD2Q9NZR1 351 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PI4KBQ9UBF8 816 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 HDAC9Q9UKV0 1011 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MSRB2Q9Y3D2 182 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 A0A1B0GVL5 298 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 SPTLC2O15270 562 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PARP1P09874 1014 aaKnown RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 SCTRP47872 440 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CERKLQ49MI3 558 aaPredicted RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 CCDC178Q5BJE1 867 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 LRSAM1Q6UWE0 723 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 HEATR3Q7Z4Q2 680 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 NME8Q8N427 588 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 FSIP1Q8NA03 581 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 SLC10A4Q96EP9 437 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CEP89Q96ST8 783 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 FHDC1Q9C0D6 1143 aaPredicted RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 KBTBD4Q9NVX7 518 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 SWAP70Q9UH65 585 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CD2APQ9Y5K6 639 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MYO3BQ8WXR4 1341 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 TTLL1O95922 423 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 XBP1P17861 261 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 TOB1P50616 345 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 GDF10P55107 478 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 NLRP5P59047 1200 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 JAG1P78504 1218 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 FOXK2Q01167 660 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 SEPT2Q15019 361 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 MAP9Q49MG5 647 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 L1TD1Q5T7N2 865 aaKnown RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 PGBD3Q8N328 593 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 FEZ1Q99689 392 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 SLC4A5Q9BY07 1137 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 TMEM39BQ9GZU3 492 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 DHX36Q9H2U1 1008 aaKnown RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 FAM8A1Q9UBU6 413 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 ZNF70Q9UC06 446 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 VGLL3A8MV65 326 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 WNT7AO00755 349 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 SH3BP5O60239 455 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 PDHBP11177 359 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 KRT2P35908 639 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 SOX9P48436 509 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 MRE11P49959 708 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 RRP1BQ14684 758 aaKnown RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 PFKFB3Q16875 520 aaPredicted RBP6.68□□□□□ -1.34
CASC3-202ENST00000394114 CCDC96Q2M329 555 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 LONRF3Q496Y0 759 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 SPECC1Q5M775 1068 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 KCTD1Q719H9 257 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 MIGA2Q7L4E1 593 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 ETFBKMTQ8IXQ9 262 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 CLIC6Q96NY7 704 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 PIGSQ96S52 555 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 TNMDQ9H2S6 317 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
CASC3-202ENST00000394114 ASTN2O75129 1339 aaPredicted RBP6.67□□□□□ -1.34
CASC3-202ENST00000394114 A0A087WWV3 80 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 WNT10BO00744 389 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 EEF2P13639 858 aaKnown RBP6.67□□□□□ -1.34
CASC3-202ENST00000394114 SLC16A2P36021 539 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 NPY5RQ15761 445 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 WWC2Q6AWC2 1192 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 ATL3Q6DD88 541 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 CCDC73Q6ZRK6 1079 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 KCNG4Q8TDN1 519 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 CCDC113Q9H0I3 377 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 EHD4Q9H223 541 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 FOXP1Q9H334 677 aaPredicted RBP6.67□□□□□ -1.34
CASC3-202ENST00000394114 TSPY26PQ9H489 355 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 MYOZ2Q9NPC6 264 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 EFR3BQ9Y2G0 817 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 CNTNAP1P78357 1384 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 PLIN4Q96Q06 1357 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 IGKV6D-41A0A0C4DH26 115 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 ENTPD3O75355 529 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 YEATS4O95619 227 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 GH2P01242 217 aa6.67□□□□□ -1.34
CASC3-202ENST00000394114 GMPSP49915 693 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms