RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 OR2W6PQ8NHA6 318 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
PDCD4-202ENST00000393104 HYOU1Q9Y4L1 999 aa12.64□□□□□ -0.39
PDCD4-202ENST00000393104 C5orf60A6NFR6 353 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 RAD51CO43502 376 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 BUB1O43683 1085 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 TRIM37O94972 964 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 CLSTN1O94985 981 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 ECM1Q16610 540 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 ZNF646O15015 1829 aaPredicted RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 ERICH2A1L162 156 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 FAM107AO95990 144 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 RFC4P35249 363 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 CHRNDQ07001 517 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 KCNK18Q7Z418 384 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 DNAAF5Q86Y56 855 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 ATP6V1G3Q96LB4 118 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 TXLNGYQ9BZA5 131 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 FAM207AQ9NSI2 230 aaPredicted RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 GRID2IPA4D2P6 1211 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 USP17L21D6R901 530 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 MYL1P05976 194 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 PDHBP11177 359 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 KLRC1P26715 233 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 GYG1P46976 350 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 RASSF7Q02833 373 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 GRB10Q13322 594 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 INF2Q27J81 1249 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 GPATCH11Q8N954 259 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 NOC4LQ9BVI4 516 aaKnown RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 DONSONQ9NYP3 566 aa12.63□□□□□ -0.39
PDCD4-202ENST00000393104 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
PDCD4-202ENST00000393104 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 MYMKA6NI61 221 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 TCP1P17987 556 aaKnown RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 CABS1Q96KC9 395 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 DCP1AQ9NPI6 582 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 SRRM3A6NNA2 597 aaPredicted RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 NR1D1P20393 614 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
PDCD4-202ENST00000393104 CAGE1Q8TC20 777 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 SCFD2Q8WU76 684 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 CYFIP2Q96F07 1278 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 CCDC42Q96M95 316 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 TSGA10Q9BZW7 698 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
PDCD4-202ENST00000393104 OPLAHO14841 1288 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 HEXIM1O94992 359 aaKnown RBP12.61□□□□□ -0.39
PDCD4-202ENST00000393104 HSD17B3P37058 310 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PRPHP41219 470 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 NLRP5P59047 1200 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
PDCD4-202ENST00000393104 LRRC57Q8N9N7 239 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 NSUN4Q96CB9 384 aaKnown RBP12.61□□□□□ -0.39
PDCD4-202ENST00000393104 FAXDC2Q96IV6 333 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 ADAM7Q9H2U9 754 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PSMA7O14818 248 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 RTN2O75298 545 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PALMO75781 387 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PAEPP09466 180 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PPARDQ03181 441 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 NFIXQ14938 502 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 NAB2Q15742 525 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 NOC3LQ8WTT2 800 aaKnown RBP12.61□□□□□ -0.39
PDCD4-202ENST00000393104 SEC14L1Q92503 715 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 PLCB1Q9NQ66 1216 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
PDCD4-202ENST00000393104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
PDCD4-202ENST00000393104 ERCC3P19447 782 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms