RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 PKN1Q16512 942 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 FAM110CQ1W6H9 321 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SH3D19Q5HYK7 790 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 TMEM63BQ5T3F8 832 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SLC9C2Q5TAH2 1124 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 FAM117BQ6P1L5 589 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 EEPD1Q7L9B9 569 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 TMCO2Q7Z6W1 182 aaPredicted RBP2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 DEFB128Q7Z7B8 93 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SYT9Q86SS6 491 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 TTC6Q86TZ1 520 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 CLEC10AQ8IUN9 316 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SIAH1Q8IUQ4 282 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 KSR1Q8IVT5 923 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SLC44A5Q8NCS7 719 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 IL27Q8NEV9 243 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SDR42E1Q8WUS8 393 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 LPAR1Q92633 364 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 USP6NLQ92738 828 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 ATG4CQ96DT6 458 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 FAM122AQ96E09 287 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 RNPC3Q96LT9 517 aaKnown RBP2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 MMP19Q99542 508 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 DNAJC2Q99543 621 aaKnown RBP2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 FTOQ9C0B1 505 aaKnown RBP eCLIP2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 NKX2-4Q9H2Z4 354 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 BOLA2Q9H3K6 86 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 ARMT1Q9H993 441 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SLC28A3Q9HAS3 691 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 COPRSQ9NQ92 184 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 XPNPEP3Q9NQH7 507 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 HOMER2Q9NSB8 354 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 MCM9Q9NXL9 1143 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 MORF4L1Q9UBU8 362 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 CLIP2Q9UDT6 1046 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 ZBTB21Q9ULJ3 1066 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 HDAC5Q9UQL6 1122 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 SLC45A1Q9Y2W3 748 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 RABGAP1Q9Y3P9 1069 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 PCDHB15Q9Y5E8 787 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 PCDHGC4Q9Y5F7 938 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 TRANK1O15050 2925 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 LAMA3Q16787 3333 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 KIAA1217Q5T5P2 1943 aa2.29□□□□□ -2.04
SNORA40.18-201ENST00000391200 NAV1Q8NEY1 1877 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CHD9Q3L8U1 2897 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 COL1A1P02452 1464 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 VCANP13611 3396 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 A0A1B0GTH6 734 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 MYADML2A6NDP7 307 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ZBBXA8MT70 800 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 USP17L12C9JPN9 530 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 USP17L21D6R901 530 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 DNM1LO00429 736 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 GOLIM4O00461 696 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 IPO8O15397 1037 aaKnown RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 STRNO43815 780 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 SORBS3O60504 671 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ZBED4O75132 1171 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 TIMP1P01033 207 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 IGHA2P01877 340 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ASGR1P07306 291 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 MYL3P08590 195 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 GNAI3P08754 354 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CLTBP09497 229 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 C6orf222P0C671 652 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 RARBP10826 455 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CYP2C9P11712 490 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 EEF2P13639 858 aaKnown RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 AKR1B1P15121 316 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 IBSPP21815 317 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 GUCY1A2P33402 732 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 SHMT1P34896 483 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 KCNQ1P51787 676 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ACLYP53396 1101 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 RARSP54136 660 aaKnown RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 PSMC6P62333 389 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 MRPS5P82675 430 aaKnown RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CNTN2Q02246 1040 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 TNFAIP2Q03169 654 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 FPGSQ05932 587 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 TMEM132BQ14DG7 1078 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CCDC144BQ3MJ40 725 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 FAM47AQ5JRC9 791 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 TMEM240Q5SV17 173 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 FAM83BQ5T0W9 1011 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 MAP3K21Q5TCX8 1036 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CCDC174Q6PII3 467 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 CXCL17Q6UXB2 119 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ATF7IPQ6VMQ6 1270 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 RNF180Q86T96 592 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 AACSQ86V21 672 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 DMRTC2Q8IXT2 367 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 LRRC56Q8IYG6 542 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ZNF444Q8N0Y2 327 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 ANKRD35Q8N283 1001 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 PGBD3Q8N328 593 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 TMEM57Q8N5G2 664 aa2.28□□□□□ -2.04
SNORA40.18-201ENST00000391200 PANK1Q8TE04 598 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms