RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RIC8AQ9NPQ8 531 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 CHD9Q3L8U1 2897 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 RAG1P15918 1043 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 IFNAR1P17181 557 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 EPHB4P54760 987 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 ANAPC15P60006 121 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 PTPN11Q06124 597 aaPredicted RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 UBE2SQ16763 222 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 MFSD5Q6N075 450 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 SESTD1Q86VW0 696 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 ZNF274Q96GC6 653 aaPredicted RBP13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 BCAS3Q9H6U6 928 aa13.09□□□□□ -0.31
IGHV4-28-201ENST00000390612 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 HAS3O00219 553 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 GGPS1O95749 300 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 SHHQ15465 462 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 DGKDQ16760 1214 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 GNPTABQ3T906 1256 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 SENP7Q9BQF6 1050 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 NOC4LQ9BVI4 516 aaKnown RBP13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 UPF3BQ9BZI7 483 aaKnown RBP13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 UBIAD1Q9Y5Z9 338 aa13.08□□□□□ -0.32
IGHV4-28-201ENST00000390612 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 FIBPO43427 364 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 SEC24BO95487 1268 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 F2P00734 622 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 SCG2P13521 617 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 ITGB5P18084 799 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 NAPAP54920 295 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 VWCEQ96DN2 955 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 ZMYND12Q9H0C1 365 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 GLT8D2Q9H1C3 349 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 NAP1L2Q9ULW6 460 aaPredicted RBP13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
IGHV4-28-201ENST00000390612 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 SPDYE3A6NKU9 549 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 CYP2C18P33260 490 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 ADCY7P51828 1080 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 FPGSQ05932 587 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 NEDD9Q14511 834 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 METTL7BQ6UX53 244 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 PHKBQ93100 1093 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 LRCH3Q96II8 777 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 WNT8AQ9H1J5 351 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 HIPK3Q9H422 1215 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 NCOA5Q9HCD5 579 aaKnown RBP13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 JADE2Q9NQC1 790 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 UMODL1Q5DID0 1318 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 CDH23Q9H251 3354 aa13.06□□□□□ -0.32
IGHV4-28-201ENST00000390612 MAFGO15525 162 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 ATP9AO75110 1047 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 KCNA2P16389 499 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 SREBF1P36956 1147 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 PSEN2P49810 448 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 CCT2P78371 535 aaKnown RBP13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 AP3B2Q13367 1082 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 RASIP1Q5U651 963 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 NLRX1Q86UT6 975 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 CDHR1Q96JP9 859 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 GPR20Q99678 358 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 TELO2Q9Y4R8 837 aa13.05□□□□□ -0.32
IGHV4-28-201ENST00000390612 GBF1Q92538 1859 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 CYP2C9P11712 490 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 CSF2RAP15509 400 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 HOXC8P31273 242 aa13.04□□□□□ -0.32
IGHV4-28-201ENST00000390612 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms