RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 CLRN3Q8NCR9 226 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 NUP43Q8NFH3 380 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 TSR2Q969E8 191 aaKnown RBP2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 FBXW5Q969U6 566 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 SHISA4Q96DD7 197 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 WNK4Q96J92 1243 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 ALG1Q9BT22 464 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 EMC7Q9NPA0 242 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 CATSPERZQ9NTU4 200 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 OXSMQ9NWU1 459 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 B4GALT6Q9UBX8 382 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 MCM8Q9UJA3 840 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 TRHDEQ9UKU6 1024 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 SLC5A6Q9Y289 635 aa2.4□□□□□ -2.03
TRAJ41-201ENST00000390496 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 FAM47E-STBD1D6RA91 191 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 FZD9O00144 591 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SCDO00767 359 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 GABRDO14764 452 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 PRPF3O43395 683 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 MYO1BO43795 1136 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 NRDCO43847 1150 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 FKBP9O95302 570 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TBC1D8O95759 1140 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 MT-CO1P00395 513 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 S100BP04271 92 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 GLI4P10075 376 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 GNAT1P11488 350 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 PRKCAP17252 672 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SLC9A1P19634 815 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 PTX3P26022 381 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 MC4RP32245 332 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 KIR2DL1P43626 348 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 KIR2DL2P43627 348 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 ERVK-21P61565 698 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 GRIN1Q05586 938 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 FYB2Q5VWT5 728 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 WWC2Q6AWC2 1192 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 ARHGAP36Q6ZRI8 547 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 FKBP9P1Q75LS8 142 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 DDX46Q7L014 1031 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 OTOP1Q7RTM1 612 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 OTOP3Q7RTS5 596 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 HDGFL2Q7Z4V5 671 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 DDX53Q86TM3 631 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 NLRX1Q86UT6 975 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SPATS2Q86XZ4 545 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 OR2W6PQ8NHA6 318 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 WDR66Q8TBY9 1149 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 USP7Q93009 1102 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 MISP3Q96FF7 219 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TRMT2BQ96GJ1 504 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TMEM169Q96HH4 297 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SYT3Q9BQG1 590 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 ORAI3Q9BRQ5 295 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 YIPF4Q9BSR8 244 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 RTFDC1Q9BY42 306 aaPredicted RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 RNF32Q9H0A6 362 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SEMA4AQ9H3S1 761 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 PRDM12Q9H4Q4 367 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 IFT22Q9H7X7 185 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 ZMAT4Q9H898 229 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TNFRSF12AQ9NP84 129 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SLC5A4Q9NY91 659 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 RBPJLQ9UBG7 517 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TNFRSF10DQ9UBN6 386 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 GPR160Q9UJ42 338 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 SRPK3Q9UPE1 567 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 APOBEC2Q9Y235 224 aaKnown RBP2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TAF6LQ9Y6J9 622 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 X6R8D5 127 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TNKSO95271 1327 aa2.39□□□□□ -2.03
TRAJ41-201ENST00000390496 TRBV23OR9-2A0A075B6M9 112 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 A0A1W2PQ45 241 aaPredicted RBP2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 A0A1W2PQY0 241 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 SHTN1A0MZ66 631 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ZC3H12DA2A288 527 aaKnown RBP2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 FAM90A27PA6NNH2 459 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 H7BY64 318 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ACOT7O00154 380 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 SGSM2O43147 1006 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 GAS7O60861 476 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 H2AFYO75367 372 aaKnown RBP2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ALDH1L1O75891 902 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 SCGB1D2O95969 90 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 HPXP02790 462 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 DBHP09172 617 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 LSSP48449 732 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ST5P78524 1137 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 LACTBP83111 547 aaPredicted RBP2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 IRF9Q00978 393 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 MCL1Q07820 350 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ITKQ08881 620 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 DUSP4Q13115 394 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 PLCL1Q15111 1095 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 TTF1Q15361 905 aaPredicted RBP2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 GPR19Q15760 415 aa2.38□□□□□ -2.03
TRAJ41-201ENST00000390496 ZNF792Q3KQV3 632 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms