RNA–Protein interactions for RNA: ENST00000388782.8

GKAP1-204, Transcript of G kinase anchoring protein 1, human

TSL 2

Gene GKAP1, Length 1,231 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GKAP1-204	ENST00000388782	TTC38	Q5R3I4	469 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	IQSEC1	Q6DN90	963 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	TRPV1	Q8NER1	839 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	ARMC5	Q96C12	935 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	WDR11	Q9BZH6	1224 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	HMX1	Q9NP08	348 aa	Predicted RBP	28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	FAM184B	Q9ULE4	1060 aa		28.1	■■■□□ 2.09
GKAP1-204	ENST00000388782	SPATA31C2	B4DYI2	1134 aa		28.09	■■■□□ 2.09
GKAP1-204	ENST00000388782	SEPT4	O43236	478 aa		28.09	■■■□□ 2.09
GKAP1-204	ENST00000388782	CCDC144B	Q3MJ40	725 aa		28.09	■■■□□ 2.09
GKAP1-204	ENST00000388782	CYP2W1	Q8TAV3	490 aa		28.09	■■■□□ 2.09
GKAP1-204	ENST00000388782	PDGFC	Q9NRA1	345 aa		28.09	■■■□□ 2.09
GKAP1-204	ENST00000388782	ATP2B1	P20020	1258 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	CNGA1	P29973	690 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	ADCYAP1R1	P41586	468 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	SOX10	P56693	466 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	FOXD4L5	Q5VV16	416 aa	Predicted RBP	28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	LENG9	Q96B70	501 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	KCNH7	Q9NS40	1196 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	HTT	P42858	3142 aa		28.08	■■■□□ 2.09
GKAP1-204	ENST00000388782	NKRF	O15226	690 aa	Known RBP eCLIP	28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	NEMF	O60524	1076 aa		28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	MSC	O60682	206 aa		28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	TXN	P10599	105 aa	Known RBP	28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	CCND3	P30281	292 aa	Predicted RBP	28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	TOB1	P50616	345 aa	Predicted RBP	28.07	■■■□□ 2.08
GKAP1-204	ENST00000388782	TNFAIP2	Q03169	654 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	SEMA3F	Q13275	785 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	DUSP28	Q4G0W2	176 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	CCDC62	Q6P9F0	684 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	GIMAP8	Q8ND71	665 aa	Predicted RBP	28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	ZNF333	Q96JL9	665 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	SENP7	Q9BQF6	1050 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	ZDHHC9	Q9Y397	364 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	ATP6V1D	Q9Y5K8	247 aa		28.06	■■■□□ 2.08
GKAP1-204	ENST00000388782	WNT7A	O00755	349 aa		28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	SLC37A4	O43826	429 aa		28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	AR	P10275	920 aa		28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	MCM7	P33993	719 aa		28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	AGO4	Q9HCK5	861 aa	Known RBP	28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	DDX41	Q9UJV9	622 aa	Known RBP	28.05	■■■□□ 2.08
GKAP1-204	ENST00000388782	MYH15	Q9Y2K3	1946 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	TBX3	O15119	743 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	ARIH2	O95376	493 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	UBA1	P22314	1058 aa	Known RBP	28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	NEDD9	Q14511	834 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	ZNF577	Q9BSK1	485 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	CHMP5	Q9NZZ3	219 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	DDX20	Q9UHI6	824 aa	Known RBP	28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	PCDHB6	Q9Y5E3	794 aa		28.04	■■■□□ 2.08
GKAP1-204	ENST00000388782	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	IPO5	O00410	1097 aa	Known RBP	28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	BMP15	O95972	392 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	RARB	P10826	455 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	CCL5	P13501	91 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	KCNA2	P16389	499 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	SMPD1	P17405	629 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	ZNF174	Q15697	407 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	POTED	Q86YR6	584 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	FAM20A	Q96MK3	541 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	ZNF396	Q96N95	335 aa	Predicted RBP	28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	SDF4	Q9BRK5	362 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	UNC93B1	Q9H1C4	597 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	KCNMB3	Q9NPA1	279 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	CEP131	Q9UPN4	1083 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782		Q9Y3F1	56 aa		28.03	■■■□□ 2.08
GKAP1-204	ENST00000388782	NFASC	O94856	1347 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	MSH4	O15457	936 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	DUSP11	O75319	330 aa	Known RBP	28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	BAG4	O95429	457 aa	Known RBP	28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	GH1	P01241	217 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	NBR1	Q14596	966 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	CALCRL	Q16602	461 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	LY6K	Q17RY6	165 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	ATL3	Q6DD88	541 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	SLFN12	Q8IYM2	578 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	ETNPPL	Q8TBG4	499 aa		28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	PAK6	Q9NQU5	681 aa	Predicted RBP	28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	GNE	Q9Y223	722 aa	Known RBP	28.02	■■■□□ 2.08
GKAP1-204	ENST00000388782	LAD1	O00515	517 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	MARCH6	O60337	910 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	FAM173B	Q6P4H8	233 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	TLK2	Q86UE8	772 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	SLC5A5	Q92911	643 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	RIT2	Q99578	217 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	RNF208	Q9H0X6	261 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	TBC1D22B	Q9NU19	505 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	PKD2L1	Q9P0L9	805 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	TCEAL9	Q9UHQ7	104 aa		28.01	■■■□□ 2.07
GKAP1-204	ENST00000388782	ADCY6	O43306	1168 aa		28	■■■□□ 2.07
GKAP1-204	ENST00000388782	GGPS1	O95749	300 aa		28	■■■□□ 2.07
GKAP1-204	ENST00000388782	SP2	Q02086	613 aa		28	■■■□□ 2.07
GKAP1-204	ENST00000388782	MTFR1	Q15390	333 aa		28	■■■□□ 2.07
GKAP1-204	ENST00000388782	CELF3	Q5SZQ8	465 aa	Known RBP	28	■■■□□ 2.07
GKAP1-204	ENST00000388782	METTL7B	Q6UX53	244 aa		28	■■■□□ 2.07
GKAP1-204	ENST00000388782	DHX37	Q8IY37	1157 aa	Known RBP	28	■■■□□ 2.07
GKAP1-204	ENST00000388782	EMID1	Q96A84	441 aa	Predicted RBP	28	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms