RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ATP5OP48047 213 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 KPNA2P52292 529 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 FLOT2Q14254 428 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 PRPSAP1Q14558 356 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 G2E3Q7L622 706 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 PLA2G4DQ86XP0 818 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 EPN3Q9H201 632 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 TPH2Q8IWU9 490 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ZNF229Q9UJW7 825 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 CCDC188H7C350 402 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 MAPK4P31152 587 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ZBED6P86452 979 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 MYL7Q01449 175 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 MAN2A1Q16706 1144 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 NBPF20Q3BBV1 942 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 FSCBQ5H9T9 825 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ABCC12Q96J65 1359 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ATP5JP18859 108 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 CATSPER1Q8NEC5 780 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ETNK1Q9HBU6 452 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 LAD1O00515 517 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 TRIM66O15016 1216 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 MYL1P05976 194 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 TRIM60Q495X7 471 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 PPM1KQ8N3J5 372 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 METTL22Q9BUU2 404 aaPredicted RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 ZCCHC17Q9NP64 241 aaKnown RBP13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 TBC1D23Q9NUY8 699 aa13.4□□□□□ -0.26
SRGAP3-202ENST00000383836 APOA1P02647 267 aa13.4□□□□□ -0.27
SRGAP3-202ENST00000383836 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.27
SRGAP3-202ENST00000383836 CHMP6Q96FZ7 201 aa13.4□□□□□ -0.27
SRGAP3-202ENST00000383836 OSBPL9Q96SU4 736 aa13.4□□□□□ -0.27
SRGAP3-202ENST00000383836 KIF22Q14807 665 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TEDDM1Q5T9Z0 273 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 SNX5Q9Y5X3 404 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 ATP6V1G3Q96LB4 118 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 ABCC4O15439 1325 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 H3BRJ5 948 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 CD2BP2O95400 341 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TRPC1P48995 793 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 PCDHA12Q9UN75 941 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 EIF4E1BA6NMX2 242 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 RASA4BC9J798 803 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 ZBTB24O43167 697 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 RASA4O43374 803 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 CENPUQ71F23 418 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 APOBEC2Q9Y235 224 aaKnown RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 MFAP3LO75121 409 aa13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
SRGAP3-202ENST00000383836 EIF4A3P38919 411 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 TMCO5AQ8N6Q1 288 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 DEPDC1BQ8WUY9 529 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 THAP9Q9H5L6 903 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 BPIFB4P59827 614 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 P2RX5Q93086 422 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 CUL4AQ13619 759 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 SMYD4Q8IYR2 804 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 STK17AQ9UEE5 414 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 KDM5BQ9UGL1 1544 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 KDRP35968 1356 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 A6NJR5 290 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 SRGAP2BP0DMP2 458 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 DAB2P98082 770 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 RNF207Q6ZRF8 634 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 WDR75Q8IWA0 830 aaKnown RBP13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM178BQ8IXR5 827 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 TRPM2O94759 1503 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 NPATQ14207 1427 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 DAB1O75553 588 aa13.38□□□□□ -0.27
SRGAP3-202ENST00000383836 ESRRBO95718 433 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms