RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 GGPS1O95749 300 aa30.58■■■□□ 2.49
NPHP3-202ENST00000383282 CKBP12277 381 aa30.58■■■□□ 2.49
NPHP3-202ENST00000383282 TROAPQ12815 778 aa30.58■■■□□ 2.49
NPHP3-202ENST00000383282 PTK7Q13308 1070 aa30.58■■■□□ 2.49
NPHP3-202ENST00000383282 ASB2Q96Q27 587 aa30.58■■■□□ 2.49
NPHP3-202ENST00000383282 SGSM2O43147 1006 aa30.57■■■□□ 2.48
NPHP3-202ENST00000383282 HOXD8P13378 290 aaPredicted RBP30.57■■■□□ 2.48
NPHP3-202ENST00000383282 SLC35G1Q2M3R5 365 aa30.57■■■□□ 2.48
NPHP3-202ENST00000383282 CNKSR3Q6P9H4 555 aa30.57■■■□□ 2.48
NPHP3-202ENST00000383282 MLXIPQ9HAP2 919 aa30.57■■■□□ 2.48
NPHP3-202ENST00000383282 SENP2Q9HC62 589 aa30.57■■■□□ 2.48
NPHP3-202ENST00000383282 CYTH3O43739 400 aa30.56■■■□□ 2.48
NPHP3-202ENST00000383282 SORBS3O60504 671 aa30.56■■■□□ 2.48
NPHP3-202ENST00000383282 UBA1P22314 1058 aaKnown RBP30.56■■■□□ 2.48
NPHP3-202ENST00000383282 GNPTABQ3T906 1256 aa30.56■■■□□ 2.48
NPHP3-202ENST00000383282 IL31RAQ8NI17 732 aa30.56■■■□□ 2.48
NPHP3-202ENST00000383282 CERS4Q9HA82 394 aa30.56■■■□□ 2.48
NPHP3-202ENST00000383282 CHD7Q9P2D1 2997 aa30.55■■■□□ 2.48
NPHP3-202ENST00000383282 TNFRSF10AO00220 468 aa30.55■■■□□ 2.48
NPHP3-202ENST00000383282 TLL1O43897 1013 aa30.55■■■□□ 2.48
NPHP3-202ENST00000383282 WDR5P61964 334 aaKnown RBP30.55■■■□□ 2.48
NPHP3-202ENST00000383282 HSDL1Q3SXM5 330 aa30.55■■■□□ 2.48
NPHP3-202ENST00000383282 CXCL10P02778 98 aa30.54■■■□□ 2.48
NPHP3-202ENST00000383282 TAP1Q03518 808 aa30.54■■■□□ 2.48
NPHP3-202ENST00000383282 GPNMBQ14956 572 aa30.54■■■□□ 2.48
NPHP3-202ENST00000383282 ARNTL2Q8WYA1 636 aa30.54■■■□□ 2.48
NPHP3-202ENST00000383282 TAF6LQ9Y6J9 622 aa30.54■■■□□ 2.48
NPHP3-202ENST00000383282 EFCAB14O75071 495 aa30.53■■■□□ 2.48
NPHP3-202ENST00000383282 STAM2O75886 525 aa30.53■■■□□ 2.48
NPHP3-202ENST00000383282 SP2Q02086 613 aa30.53■■■□□ 2.48
NPHP3-202ENST00000383282 SKIV2LQ15477 1246 aaKnown RBP30.53■■■□□ 2.48
NPHP3-202ENST00000383282 CTCFLQ8NI51 663 aaPredicted RBP30.53■■■□□ 2.48
NPHP3-202ENST00000383282 MAP4K1Q92918 833 aa30.53■■■□□ 2.48
NPHP3-202ENST00000383282 ZBED2Q9BTP6 218 aa30.53■■■□□ 2.48
NPHP3-202ENST00000383282 ABHD14A-ACY1A0A1B0GW23 586 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 RFXAPO00287 272 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 NBNO60934 754 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 POU3F3P20264 500 aaPredicted RBP30.52■■■□□ 2.48
NPHP3-202ENST00000383282 CASC1Q6TDU7 716 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 MB21D2Q8IYB1 491 aaPredicted RBP30.52■■■□□ 2.48
NPHP3-202ENST00000383282 IGDCC4Q8TDY8 1250 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 PIBF1Q8WXW3 757 aa30.52■■■□□ 2.48
NPHP3-202ENST00000383282 ZFP91Q96JP5 570 aaPredicted RBP30.52■■■□□ 2.48
NPHP3-202ENST00000383282 RBM8AQ9Y5S9 174 aaKnown RBP30.52■■■□□ 2.48
NPHP3-202ENST00000383282 TRIP12Q14669 1992 aaPredicted RBP30.52■■■□□ 2.48
NPHP3-202ENST00000383282 TTC28Q96AY4 2481 aa30.51■■■□□ 2.48
NPHP3-202ENST00000383282 NOP56O00567 594 aaKnown RBP30.51■■■□□ 2.47
NPHP3-202ENST00000383282 KIF5BP33176 963 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 ANTXR2P58335 489 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 ZNF618Q5T7W0 954 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 TET1Q8NFU7 2136 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 CUL5Q93034 780 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 MAP3K14Q99558 947 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 MTCH2Q9Y6C9 303 aa30.51■■■□□ 2.47
NPHP3-202ENST00000383282 DDAH1O94760 285 aa30.5■■■□□ 2.47
NPHP3-202ENST00000383282 IRX6P78412 446 aaPredicted RBP30.5■■■□□ 2.47
NPHP3-202ENST00000383282 ZNF200P98182 395 aaPredicted RBP30.5■■■□□ 2.47
NPHP3-202ENST00000383282 IKBKEQ14164 716 aa30.5■■■□□ 2.47
NPHP3-202ENST00000383282 TRIM71Q2Q1W2 868 aaKnown RBP30.5■■■□□ 2.47
NPHP3-202ENST00000383282 ADAMTS19Q8TE59 1207 aa30.5■■■□□ 2.47
NPHP3-202ENST00000383282 GPKOWQ92917 476 aaPredicted RBP eCLIP30.5■■■□□ 2.47
NPHP3-202ENST00000383282 RRP36Q96EU6 259 aaKnown RBP30.5■■■□□ 2.47
NPHP3-202ENST00000383282 C16orf70Q9BSU1 422 aa30.5■■■□□ 2.47
NPHP3-202ENST00000383282 C17orf102A2RUQ5 167 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 NEDD9Q14511 834 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 AAK1Q2M2I8 961 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 ZNF654Q8IZM8 581 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 SMARCC2Q8TAQ2 1214 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 MTA3Q9BTC8 594 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 SPZ1Q9BXG8 430 aa30.49■■■□□ 2.47
NPHP3-202ENST00000383282 SEC63Q9UGP8 760 aaKnown RBP30.49■■■□□ 2.47
NPHP3-202ENST00000383282 FRMPD4Q14CM0 1322 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 EPOPA6NHQ4 379 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 H3BRB1 525 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 ARHGEF15O94989 841 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 ICAM3P32942 547 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 DEFB103AP81534 67 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 WNT8BQ93098 351 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 INPP4AQ96PE3 977 aaPredicted RBP30.48■■■□□ 2.47
NPHP3-202ENST00000383282 TUT1Q9H6E5 874 aaKnown RBP30.48■■■□□ 2.47
NPHP3-202ENST00000383282 LY9Q9HBG7 655 aa30.48■■■□□ 2.47
NPHP3-202ENST00000383282 EMSYQ7Z589 1322 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 MYH7BA7E2Y1 1941 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 BAZ2BQ9UIF8 2168 aaKnown RBP30.47■■■□□ 2.47
NPHP3-202ENST00000383282 LGALS2P05162 132 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 GNAQP50148 359 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 MRPS9P82933 396 aaKnown RBP30.47■■■□□ 2.47
NPHP3-202ENST00000383282 TRAF7Q6Q0C0 670 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 METTL7BQ6UX53 244 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 NFXL1Q6ZNB6 911 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 SERINC5Q86VE9 423 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 ATP6V0A1Q93050 837 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 UHRF1Q96T88 793 aaPredicted RBP30.47■■■□□ 2.47
NPHP3-202ENST00000383282 LZTS2Q9BRK4 669 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 USP26Q9BXU7 913 aa30.47■■■□□ 2.47
NPHP3-202ENST00000383282 FIBPO43427 364 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 LGR5O75473 907 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 SMARCA1P28370 1054 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 THPOP40225 353 aa30.46■■■□□ 2.47
NPHP3-202ENST00000383282 TMTC2Q8N394 836 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms