RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TRAPPC10P48553 1259 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 TOB1P50616 345 aaPredicted RBP17.58■□□□□ 0.4
PDGFB-202ENST00000381551 SP2Q02086 613 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 MTMR1Q13613 665 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 PKP1Q13835 747 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 TTLL4Q14679 1199 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 Q4G0T1 1027 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 LENG9Q96B70 501 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 CDHR1Q96JP9 859 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 NAP1L4Q99733 375 aaKnown RBP17.58■□□□□ 0.4
PDGFB-202ENST00000381551 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.4
PDGFB-202ENST00000381551 RNF208Q9H0X6 261 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 PAK6Q9NQU5 681 aaPredicted RBP17.58■□□□□ 0.4
PDGFB-202ENST00000381551 DDX20Q9UHI6 824 aaKnown RBP17.58■□□□□ 0.4
PDGFB-202ENST00000381551 MRVI1Q9Y6F6 885 aa17.58■□□□□ 0.4
PDGFB-202ENST00000381551 KIAA1217Q5T5P2 1943 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 WNT7AO00755 349 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 CCNT1O60563 726 aaKnown RBP17.57■□□□□ 0.4
PDGFB-202ENST00000381551 ATP9AO75110 1047 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 DDIT3P35638 169 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 RESTQ13127 1097 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 LY6KQ17RY6 165 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 PRR16Q569H4 304 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 LHX8Q68G74 356 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 PLA2G4DQ86XP0 818 aa17.57■□□□□ 0.4
PDGFB-202ENST00000381551 ZSCAN16Q9H4T2 348 aaPredicted RBP17.57■□□□□ 0.4
PDGFB-202ENST00000381551 GNEQ9Y223 722 aaKnown RBP17.57■□□□□ 0.4
PDGFB-202ENST00000381551 DUSP11O75319 330 aaKnown RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 ZSCAN22P10073 491 aaPredicted RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 GCFC2P16383 781 aaKnown RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
PDGFB-202ENST00000381551 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
PDGFB-202ENST00000381551 SENP7Q9BQF6 1050 aa17.56■□□□□ 0.4
PDGFB-202ENST00000381551 AGO4Q9HCK5 861 aaKnown RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 DDX25Q9UHL0 483 aaKnown RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 NOL7Q9UMY1 257 aaKnown RBP17.56■□□□□ 0.4
PDGFB-202ENST00000381551 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
PDGFB-202ENST00000381551 Q9Y3F1 56 aa17.56■□□□□ 0.4
PDGFB-202ENST00000381551 POTEFA5A3E0 1075 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDGFB-202ENST00000381551 MSCO60682 206 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 BRD1O95696 1058 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 KCNA2P16389 499 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 PTGS1P23219 599 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 SETQ01105 290 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-202ENST00000381551 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 GJC2Q5T442 439 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-202ENST00000381551 COPS5Q92905 334 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 LENG1Q96BZ8 264 aaPredicted RBP17.55■□□□□ 0.4
PDGFB-202ENST00000381551 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
PDGFB-202ENST00000381551 DEFB118Q96PH6 123 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 BCAS3Q9H6U6 928 aa17.55■□□□□ 0.4
PDGFB-202ENST00000381551 MSH4O15457 936 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 DYNC1LI2O43237 492 aaPredicted RBP17.54■□□□□ 0.4
PDGFB-202ENST00000381551 SLC37A4O43826 429 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 GJB1P08034 283 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 RARBP10826 455 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 UBA1P22314 1058 aaKnown RBP17.54■□□□□ 0.4
PDGFB-202ENST00000381551 NEDD9Q14511 834 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 ZNF174Q15697 407 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 CELF3Q5SZQ8 465 aaKnown RBP17.54■□□□□ 0.4
PDGFB-202ENST00000381551 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 GIMAP8Q8ND71 665 aaPredicted RBP17.54■□□□□ 0.4
PDGFB-202ENST00000381551 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
PDGFB-202ENST00000381551 IPO5O00410 1097 aaKnown RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 DHX15O43143 795 aaKnown RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 SGPL1O95470 568 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 F13A1P00488 732 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 GH1P01241 217 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 NKX3-2P78367 333 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 ARHGAP1Q07960 439 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 ITGB3BPQ13352 177 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 LAMC2Q13753 1193 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 NBR1Q14596 966 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 DHX37Q8IY37 1157 aaKnown RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 SLC5A5Q92911 643 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
PDGFB-202ENST00000381551 UIMC1Q96RL1 719 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 ZNF577Q9BSK1 485 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 KCNMB3Q9NPA1 279 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 PKD2L1Q9P0L9 805 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 PCDHB6Q9Y5E3 794 aa17.53■□□□□ 0.4
PDGFB-202ENST00000381551 TBX3O15119 743 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 GGPS1O95749 300 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 MCM7P33993 719 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 GJA9P57773 515 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
PDGFB-202ENST00000381551 CYFIP1Q7L576 1253 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 TLK2Q86UE8 772 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 C4orf32Q8N8J7 132 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 HAS1Q92839 578 aa17.52■□□□□ 0.4
PDGFB-202ENST00000381551 ABHD8Q96I13 439 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms