RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 PRR16Q569H4 304 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 FOXD4L5Q5VV16 416 aaPredicted RBP14.4□□□□□ -0.1
SMN2-203ENST00000380743 CCDC62Q6P9F0 684 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 SCFD2Q8WU76 684 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 FOXD4L4Q8WXT5 416 aaPredicted RBP14.4□□□□□ -0.1
SMN2-203ENST00000380743 LENG9Q96B70 501 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 IPO9Q96P70 1041 aaKnown RBP14.4□□□□□ -0.1
SMN2-203ENST00000380743 HMX1Q9NP08 348 aaPredicted RBP14.4□□□□□ -0.1
SMN2-203ENST00000380743 KCNH7Q9NS40 1196 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 ZDHHC9Q9Y397 364 aa14.4□□□□□ -0.1
SMN2-203ENST00000380743 ARP10275 920 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 CCL5P13501 91 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 SMPD1P17405 629 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 ICAM3P32942 547 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 MTMR1Q13613 665 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 NBR1Q14596 966 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 GJC2Q5T442 439 aaPredicted RBP14.39□□□□□ -0.11
SMN2-203ENST00000380743 ANO1Q5XXA6 986 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 NIPA1Q7RTP0 329 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 BRAPQ7Z569 592 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 NLRX1Q86UT6 975 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
SMN2-203ENST00000380743 GPRASP2Q96D09 838 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
SMN2-203ENST00000380743 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
SMN2-203ENST00000380743 MAFGO15525 162 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 FIBPO43427 364 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 SLC37A4O43826 429 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 ATP9AO75110 1047 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 BRD1O95696 1058 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 TXNP10599 105 aaKnown RBP14.38□□□□□ -0.11
SMN2-203ENST00000380743 TGFB3P10600 412 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 AKR1A1P14550 325 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 TNFAIP2Q03169 654 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 TTLL4Q14679 1199 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 Q4G0T1 1027 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 MOXD1Q6UVY6 613 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 PLA2G4DQ86XP0 818 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 COPS5Q92905 334 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMN2-203ENST00000380743 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
SMN2-203ENST00000380743 BCAS3Q9H6U6 928 aa14.38□□□□□ -0.11
SMN2-203ENST00000380743 PAK6Q9NQU5 681 aaPredicted RBP14.38□□□□□ -0.11
SMN2-203ENST00000380743 DDX25Q9UHL0 483 aaKnown RBP14.38□□□□□ -0.11
SMN2-203ENST00000380743 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 LHX8Q68G74 356 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 KCNV1Q6PIU1 500 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 CDHR1Q96JP9 859 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 AGO4Q9HCK5 861 aaKnown RBP14.37□□□□□ -0.11
SMN2-203ENST00000380743 PKD2L1Q9P0L9 805 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
SMN2-203ENST00000380743 NOL7Q9UMY1 257 aaKnown RBP14.37□□□□□ -0.11
SMN2-203ENST00000380743 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
SMN2-203ENST00000380743 PCDHB6Q9Y5E3 794 aa14.37□□□□□ -0.11
SMN2-203ENST00000380743 POTEFA5A3E0 1075 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 MSH4O15457 936 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 F13A1P00488 732 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 KCNA2P16389 499 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 MCM7P33993 719 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 ZNF174Q15697 407 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 RILPL1Q5EBL4 403 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 TTC38Q5R3I4 469 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 GJA10Q969M2 543 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 SENP7Q9BQF6 1050 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 SORBS3O60504 671 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
SMN2-203ENST00000380743 RARBP10826 455 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 CYFIP1Q7L576 1253 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 ETNPPLQ8TBG4 499 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
SMN2-203ENST00000380743 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 DYNC1LI2O43237 492 aaPredicted RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 NEMFO60524 1076 aa14.35□□□□□ -0.11
SMN2-203ENST00000380743 GGPS1O95749 300 aa14.35□□□□□ -0.11
SMN2-203ENST00000380743 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 ARHGAP1Q07960 439 aa14.35□□□□□ -0.11
SMN2-203ENST00000380743 FOXD4L6Q3SYB3 417 aaPredicted RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 CELF3Q5SZQ8 465 aaKnown RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 FOXD4L3Q6VB84 417 aaPredicted RBP14.35□□□□□ -0.11
SMN2-203ENST00000380743 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
SMN2-203ENST00000380743 HAS1Q92839 578 aa14.35□□□□□ -0.11
SMN2-203ENST00000380743 TMEM60Q9H2L4 133 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms