RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FCHSD1Q86WN1 690 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 PHOSPHO2Q8TCD6 241 aa19.54■□□□□ 0.72
SMN2-201ENST00000380741 ZFP91Q96JP5 570 aaPredicted RBP19.54■□□□□ 0.72
SMN2-201ENST00000380741 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 BAIAP3O94812 1187 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 GGPS1O95749 300 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 UBA1P22314 1058 aaKnown RBP19.53■□□□□ 0.72
SMN2-201ENST00000380741 CCND2P30279 289 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 SP2Q02086 613 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 RBL2Q08999 1139 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 CELF3Q5SZQ8 465 aaKnown RBP19.53■□□□□ 0.72
SMN2-201ENST00000380741 LRRC8DQ7L1W4 858 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 HERC6Q8IVU3 1022 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 MB21D2Q8IYB1 491 aaPredicted RBP19.53■□□□□ 0.72
SMN2-201ENST00000380741 GPKOWQ92917 476 aaPredicted RBP eCLIP19.53■□□□□ 0.72
SMN2-201ENST00000380741 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 THEGQ9P2T0 379 aa19.53■□□□□ 0.72
SMN2-201ENST00000380741 PRRC2BQ5JSZ5 2229 aaKnown RBP19.52■□□□□ 0.72
SMN2-201ENST00000380741 DOCK5Q9H7D0 1870 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 PPFIA4O75335 1185 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 CKBP12277 381 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 CERS4Q9HA82 394 aa19.52■□□□□ 0.72
SMN2-201ENST00000380741 RBM8AQ9Y5S9 174 aaKnown RBP19.52■□□□□ 0.72
SMN2-201ENST00000380741 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 TGFB3P10600 412 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 KCNJ6P48051 423 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 MICALL1Q8N3F8 863 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 ATXN2LQ8WWM7 1075 aaKnown RBP19.51■□□□□ 0.71
SMN2-201ENST00000380741 WNT8BQ93098 351 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
SMN2-201ENST00000380741 RBAK-RBAKDNI3L0D1 243 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 RFXAPO00287 272 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 NBNO60934 754 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 PARNO95453 639 aaKnown RBP19.5■□□□□ 0.71
SMN2-201ENST00000380741 CXCL10P02778 98 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 WDR5P61964 334 aaKnown RBP19.5■□□□□ 0.71
SMN2-201ENST00000380741 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
SMN2-201ENST00000380741 TAP1Q03518 808 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 PTK7Q13308 1070 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 HIC1Q14526 733 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 C16orf70Q9BSU1 422 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 LY9Q9HBG7 655 aa19.5■□□□□ 0.71
SMN2-201ENST00000380741 EPOPA6NHQ4 379 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 KIF28PB7ZC32 967 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 MRPS9P82933 396 aaKnown RBP19.49■□□□□ 0.71
SMN2-201ENST00000380741 TCTN1Q2MV58 587 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 TRIM71Q2Q1W2 868 aaKnown RBP19.49■□□□□ 0.71
SMN2-201ENST00000380741 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 TMCO2Q7Z6W1 182 aaPredicted RBP19.49■□□□□ 0.71
SMN2-201ENST00000380741 ASB2Q96Q27 587 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 MLXIPQ9HAP2 919 aa19.49■□□□□ 0.71
SMN2-201ENST00000380741 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
SMN2-201ENST00000380741 TLL1O43897 1013 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 DDAH1O94760 285 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 DEFB103AP81534 67 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 MBTPS1Q14703 1052 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 GNPTABQ3T906 1256 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 ZNF618Q5T7W0 954 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
SMN2-201ENST00000380741 ARNTL2Q8WYA1 636 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 SPZ1Q9BXG8 430 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 NCOR1O75376 2440 aa19.48■□□□□ 0.71
SMN2-201ENST00000380741 PRC1O43663 620 aa19.47■□□□□ 0.71
SMN2-201ENST00000380741 POU3F3P20264 500 aaPredicted RBP19.47■□□□□ 0.71
SMN2-201ENST00000380741 MRPS5P82675 430 aaKnown RBP19.47■□□□□ 0.71
SMN2-201ENST00000380741 CASC1Q6TDU7 716 aa19.47■□□□□ 0.71
SMN2-201ENST00000380741 SPRED2Q7Z698 418 aa19.47■□□□□ 0.71
SMN2-201ENST00000380741 RRP36Q96EU6 259 aaKnown RBP19.47■□□□□ 0.71
SMN2-201ENST00000380741 INPP4AQ96PE3 977 aaPredicted RBP19.47■□□□□ 0.71
SMN2-201ENST00000380741 MTCH2Q9Y6C9 303 aa19.47■□□□□ 0.71
SMN2-201ENST00000380741 LCHNA4D1U4 455 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 H3BRB1 525 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 GTPBP6O43824 516 aaPredicted RBP19.46■□□□□ 0.71
SMN2-201ENST00000380741 STAM2O75886 525 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 LGALS2P05162 132 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 ICAM3P32942 547 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 KIF5BP33176 963 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
SMN2-201ENST00000380741 KRT40Q6A162 431 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 METTL7BQ6UX53 244 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 SERINC5Q86VE9 423 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
SMN2-201ENST00000380741 TSPYL2Q9H2G4 693 aaPredicted RBP19.46■□□□□ 0.71
SMN2-201ENST00000380741 TUT1Q9H6E5 874 aaKnown RBP19.46■□□□□ 0.71
SMN2-201ENST00000380741 RTEL1Q9NZ71 1219 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 MICAL3Q7RTP6 2002 aa19.46■□□□□ 0.71
SMN2-201ENST00000380741 TCF20Q9UGU0 1960 aaKnown RBP19.45■□□□□ 0.7
SMN2-201ENST00000380741 ABHD14A-ACY1A0A1B0GW23 586 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms