RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 KLHDC4Q8TBB5 520 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 CAGE1Q8TC20 777 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 JAKMIP2Q96AA8 810 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 RMDN2Q96LZ7 410 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 TRPV5Q9NQA5 729 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 ADAM22Q9P0K1 906 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PFDN1O60925 122 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 FLOT1O75955 427 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 CAMTA2O94983 1202 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 CCDC166P0CW27 439 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PFKFB1P16118 471 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 FGFR2P21802 821 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 BMP6P22004 513 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 TMOD1P28289 359 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PNOCQ13519 176 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 POSTNQ15063 836 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PPP2R5BQ15173 497 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 CFAP58Q5T655 872 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 SYNE3Q6ZMZ3 975 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 AZIN2Q96A70 460 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 TAF1DQ9H5J8 278 aaPredicted RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PAIP2BQ9ULR5 123 aaKnown RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 SBF2Q86WG5 1849 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 AKAP11Q9UKA4 1901 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 MROH7-TTC4A0A0A0MT08 1334 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PHF20L1A8MW92 1017 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 ATP6V1C1P21283 382 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 DRD4P21917 467 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 ITGA6P23229 1130 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 IGHMBP2P38935 993 aaKnown RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 OXCT1P55809 520 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 KLC1Q07866 573 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 PAK2Q13177 524 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 IMMTQ16891 758 aaKnown RBP8.2□□□□□ -1.1
CDKL5-201ENST00000379989 KIAA0753Q2KHM9 967 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 OLFM4Q6UX06 510 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 LDHAL6AQ6ZMR3 332 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 MMGT1Q8N4V1 131 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 SMC1BQ8NDV3 1235 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 RUBCNQ92622 972 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 A0A1B0GUL6 1792 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 MAST2Q6P0Q8 1798 aa8.2□□□□□ -1.1
CDKL5-201ENST00000379989 A0A0D9SFI3 127 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 GSTT1P30711 240 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CASP14P31944 242 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 PCK1P35558 622 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CRKLP46109 303 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SESN3P58005 492 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SEPT2Q15019 361 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 METTL24Q5JXM2 366 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CCDC70Q6NSX1 233 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 PPFIBP1Q86W92 1011 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 RAPGEF5Q92565 580 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 ZBTB1Q9Y2K1 713 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CLIC4Q9Y696 253 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 IFIT3O14879 490 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 USO1O60763 962 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 GNAZP19086 355 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 FMR1Q06787 632 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 KIF5AQ12840 1032 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 UBE4AQ14139 1066 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CMPK2Q5EBM0 449 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SPTY2D1Q68D10 685 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 ZNF280DQ6N043 979 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SESTD1Q86VW0 696 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 LONP2Q86WA8 852 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 ARFGAP2Q8N6H7 521 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 MARCH10Q8NA82 808 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CNNM1Q9NRU3 951 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SWAP70Q9UH65 585 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 SYNPO2Q9UMS6 1093 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 REXO2Q9Y3B8 237 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 NID2Q14112 1375 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 KAT6BQ8WYB5 2073 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 HNRNPRO43390 633 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 FXR1P51114 621 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 P3H1Q32P28 736 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 FAM133BQ5BKY9 247 aaKnown RBP8.19□□□□□ -1.1
CDKL5-201ENST00000379989 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 NEK9Q8TD19 979 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 WHAMMQ8TF30 809 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 NEUROD6Q96NK8 337 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 INIPQ9NRY2 104 aa8.19□□□□□ -1.1
CDKL5-201ENST00000379989 BTAF1O14981 1849 aa8.18□□□□□ -1.1
CDKL5-201ENST00000379989 TAF1LQ8IZX4 1826 aa8.18□□□□□ -1.1
CDKL5-201ENST00000379989 PNPLA7Q6ZV29 1317 aa8.18□□□□□ -1.1
CDKL5-201ENST00000379989 hCG_2014768A0A024R1R8 64 aa8.18□□□□□ -1.1
CDKL5-201ENST00000379989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.18□□□□□ -1.1
CDKL5-201ENST00000379989 SUPT3HO75486 399 aa8.18□□□□□ -1.1
CDKL5-201ENST00000379989 KRT38O76015 456 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms