RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 GBP5Q96PP8 586 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.94□□□□□ -1.14
DDX58-202ENST00000379883 POLD4Q9HCU8 107 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 PARP2Q9UGN5 583 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 L3MBTL1Q9Y468 752 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 KCNK3O14649 394 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 GNAT2P19087 354 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 EPS15P42566 896 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 MSH2P43246 934 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 ATP2C1P98194 919 aaPredicted RBP7.94□□□□□ -1.14
DDX58-202ENST00000379883 PTGDRQ13258 359 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 UBE3CQ15386 1083 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 CCDC6Q16204 474 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 MUM1Q2TAK8 710 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 INTS8Q75QN2 995 aaKnown RBP7.94□□□□□ -1.14
DDX58-202ENST00000379883 FANCBQ8NB91 859 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 PPFIBP2Q8ND30 876 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 TRAPPC9Q96Q05 1148 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 TLR10Q9BXR5 811 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 CCDC113Q9H0I3 377 aa7.94□□□□□ -1.14
DDX58-202ENST00000379883 USP15Q9Y4E8 981 aaPredicted RBP7.94□□□□□ -1.14
DDX58-202ENST00000379883 IGF2BP3O00425 579 aaKnown RBP eCLIP7.93□□□□□ -1.14
DDX58-202ENST00000379883 KRIT1O00522 736 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 PALMO75781 387 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 AGTP01019 485 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 CCNG1P51959 295 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 EHHADHQ08426 723 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 ALX1Q15699 326 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 DBN1Q16643 649 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 FGD4Q96M96 766 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 SEC31BQ9NQW1 1179 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 GDAQ9Y2T3 454 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 AFF2P51816 1311 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 IDH1O75874 414 aaKnown RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 SERPING1P05155 500 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 SNRPA1P09661 255 aaKnown RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 SKIP12755 728 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 ALADP13716 330 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 CHN1P15882 459 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 CALML3P27482 149 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 DTHD1Q6ZMT9 781 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 PLBD2Q8NHP8 589 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 NEK9Q8TD19 979 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 MS4A14Q96JA4 679 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 GORASP1Q9BQQ3 440 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 PCDHGC5Q9Y5F6 944 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 A6NHS1 94 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 PPFIA2O75334 1257 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 A1BGP04217 495 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 ZC3H6P61129 1189 aaKnown RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 MAN2A1Q16706 1144 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 AKNAD1Q5T1N1 836 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 KLHDC7AQ5VTJ3 777 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 ZNF365Q70YC5 407 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 KRT26Q7Z3Y9 468 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 SPATA21Q7Z572 469 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 SESTD1Q86VW0 696 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 STAG2Q8N3U4 1231 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 EZH1Q92800 747 aaPredicted RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 LRRC27Q9C0I9 530 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 PUS7LQ9H0K6 701 aaKnown RBP7.93□□□□□ -1.14
DDX58-202ENST00000379883 TCP11L1Q9NUJ3 509 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 ARL2BPQ9Y2Y0 163 aa7.93□□□□□ -1.14
DDX58-202ENST00000379883 XDHP47989 1333 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TLDC2A0PJX2 215 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 PDE4DQ08499 809 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 MTHFD1LQ6UB35 978 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TBC1D10CQ8IV04 446 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 WDR66Q8TBY9 1149 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ZNF570Q96NI8 536 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 FAM207AQ9NSI2 230 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 PANK4Q9NVE7 773 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 SMARCAL1Q9NZC9 954 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 DIP2AQ14689 1571 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 UQCRFS1P1P0C7P4 283 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ALDH5A1P51649 535 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 POLE2P56282 527 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 NAB2Q15742 525 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 CMPK2Q5EBM0 449 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 PDXDC2PQ6P474 469 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 PIGWQ7Z7B1 504 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 AGGF1Q8N302 714 aaeCLIP7.92□□□□□ -1.14
DDX58-202ENST00000379883 LZICQ8WZA0 190 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 SYN2Q92777 582 aaPredicted RBP7.92□□□□□ -1.14
DDX58-202ENST00000379883 FMO2Q99518 471 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TTYH3Q9C0H2 523 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 RIMBP3CA6NJZ7 1639 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 RIMBP3BA6NNM3 1639 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 RIMBP3Q9UFD9 1639 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ABCB11O95342 1321 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 TRIM49BA6NDI0 452 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 RHOBTB3O94955 611 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 MCM7P33993 719 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 SGSM1Q2NKQ1 1148 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ZNF654Q8IZM8 581 aa7.92□□□□□ -1.14
DDX58-202ENST00000379883 ANKRD13CQ8N6S4 541 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms