RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 PSMB7Q99436 277 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 DYRK4Q9NR20 520 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 SKIP12755 728 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 ABCB4P21439 1286 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 MMS22LQ6ZRQ5 1243 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 POLE3Q9NRF9 147 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 NEMP1O14524 444 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 KIF19Q2TAC6 998 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 RMDN2Q96LZ7 410 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 PRRC2BQ5JSZ5 2229 aaKnown RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 LONP1P36776 959 aaKnown RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 BLVRAP53004 296 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 MCF2P10911 925 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 UHRF1BP1LA0JNW5 1464 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 ARHGEF10O15013 1369 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 C19orf44Q9H6X5 657 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 USP21Q9UK80 565 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 JRKLQ9Y4A0 524 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 GNAT1P11488 350 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 DEPDC1BQ8WUY9 529 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 TSSK1BQ9BXA7 367 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 APPBP2Q92624 585 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 SUN2Q9UH99 717 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 ANGPTL2Q9UKU9 493 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MYO1FO00160 1098 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 KCNK3O14649 394 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MAGEA1P43355 309 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 ZBTB41Q5SVQ8 909 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 FPGT-TNNI3KV9GXZ4 949 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 PYGBP11216 843 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MAP2K2P36507 400 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 NCLNQ969V3 563 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 LCMT1Q9UIC8 334 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 KRT39Q6A163 491 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 ANP32DO95626 131 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 ARL4DP49703 201 aa12.11□□□□□ -0.47
PTCHD1-201ENST00000379361 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 CLTAP09496 248 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 ZNF713Q8N859 430 aaPredicted RBP12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 NAF1Q96HR8 494 aaKnown RBP12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 ARHGAP10A1A4S6 786 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 BNIP3LO60238 219 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 SLC9A5Q14940 896 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 ZFYVE19Q96K21 471 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 MSH2P43246 934 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 NEK8Q86SG6 692 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 MAPKAPK5Q8IW41 473 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 CCNYQ8ND76 341 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 GAP43P17677 238 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 STAT2P52630 851 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 IMPG1Q17R60 797 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 XAGE2Q96GT9 111 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 VEPH1Q14D04 833 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 SLC26A7Q8TE54 656 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 BLMP54132 1417 aaPredicted RBP12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 FAM180AQ6UWF9 173 aa12.1□□□□□ -0.47
PTCHD1-201ENST00000379361 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 MPP6Q9NZW5 540 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 EVPLQ92817 2033 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 TOM1L1O75674 476 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 DAB2P98082 770 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 TAGAPQ8N103 731 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 ARHGEF17Q96PE2 2063 aaPredicted RBP12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 PCGF5Q86SE9 256 aa12.09□□□□□ -0.47
PTCHD1-201ENST00000379361 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms