RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
RER1-203ENST00000378513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■□□□□ 9.4
RER1-203ENST00000378513 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
RER1-203ENST00000378513 RIOX1Q9H6W3 641 aa17.06■□□□□ 0.32
RER1-203ENST00000378513 FTCDO95954 541 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 POLR2FP61218 127 aaKnown RBP17.05■□□□□ 0.32
RER1-203ENST00000378513 RREB1Q92766 1687 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 GYS1P13807 737 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 COASYQ13057 564 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 USH1GQ495M9 461 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
RER1-203ENST00000378513 ERGIC2Q96RQ1 377 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 NUP58Q9BVL2 599 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 EHD4Q9H223 541 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.325e-7■■■□□ 15.9
RER1-203ENST00000378513 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 PCDHA12Q9UN75 941 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 PLAGL2Q9UPG8 496 aa17.05■□□□□ 0.32
RER1-203ENST00000378513 SYF2O95926 243 aaKnown RBP17.04■□□□□ 0.32
RER1-203ENST00000378513 MYL1P05976 194 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 ACTN1P12814 892 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 DDR1Q08345 913 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 HERC4Q5GLZ8 1057 aaPredicted RBP17.04■□□□□ 0.32
RER1-203ENST00000378513 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
RER1-203ENST00000378513 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 KRT18P05783 430 aaKnown RBP17.04■□□□□ 0.32
RER1-203ENST00000378513 MAN2A1Q16706 1144 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 EXOC4Q96A65 974 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
RER1-203ENST00000378513 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 HPCAL4Q9UM19 191 aa17.04■□□□□ 0.32
RER1-203ENST00000378513 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
RER1-203ENST00000378513 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 TUBB2AQ13885 445 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 TUBB2BQ9BVA1 445 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 SH2D4AQ9H788 454 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 IL1R1P14778 569 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 ATP2B4P23634 1241 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 CASP5P51878 434 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
RER1-203ENST00000378513 PSMC6P62333 389 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 RAPGEF1Q13905 1077 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 VPS72Q15906 364 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 MUM1L1Q5H9M0 696 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 BAP1Q92560 729 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
RER1-203ENST00000378513 TLR2O60603 784 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
RER1-203ENST00000378513 TACC1O75410 805 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 GTF2A1P52655 376 aaPredicted RBP17.02■□□□□ 0.32
RER1-203ENST00000378513 IKQ13123 557 aaPredicted RBP17.02■□□□□ 0.32
RER1-203ENST00000378513 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 CCDC181Q5TID7 509 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 GPBP1Q86WP2 473 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 TRADDQ15628 312 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 WDR93Q6P2C0 686 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 FAM133AQ8N9E0 248 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 DNAJC19Q96DA6 116 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 OSBPL9Q96SU4 736 aa17.02■□□□□ 0.32
RER1-203ENST00000378513 P2RX7Q99572 595 aaKnown RBP17.02■□□□□ 0.32
RER1-203ENST00000378513 SFI1A8K8P3 1242 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 GDF11O95390 407 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 SHMT1P34896 483 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.315e-7■■■■■ 28.7
RER1-203ENST00000378513 SPATA4Q8NEY3 305 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 TBC1D5Q92609 795 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 RBM17Q96I25 401 aaKnown RBP17.02■□□□□ 0.31
RER1-203ENST00000378513 ADAMTS1Q9UHI8 967 aa17.02■□□□□ 0.31
RER1-203ENST00000378513 G3V3G9 751 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 TTLL1O95922 423 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 PLCG2P16885 1265 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 DCAF8Q5TAQ9 597 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
RER1-203ENST00000378513 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 RBM12Q9NTZ6 932 aaKnown RBP17.01■□□□□ 0.31
RER1-203ENST00000378513 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 HOXA13P31271 388 aaPredicted RBP17.01■□□□□ 0.31
RER1-203ENST00000378513 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
RER1-203ENST00000378513 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
RER1-203ENST00000378513 PRR16Q569H4 304 aa17.01■□□□□ 0.31
RER1-203ENST00000378513 CCNI2Q6ZMN8 369 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms