RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 ZNF365Q70YC5 407 aa19.57■□□□□ 0.72
RER1-202ENST00000378512 INPP4AQ96PE3 977 aaPredicted RBP19.57■□□□□ 0.72
RER1-202ENST00000378512 PSTPIP2Q9H939 334 aa19.57■□□□□ 0.72
RER1-202ENST00000378512 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
RER1-202ENST00000378512 V9GY48 417 aaPredicted RBP19.57■□□□□ 0.72
RER1-202ENST00000378512 DOCK5Q9H7D0 1870 aa19.57■□□□□ 0.72
RER1-202ENST00000378512 RBAK-RBAKDNI3L0D1 243 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 GH1P01241 217 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 MYL3P08590 195 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 PDIA3P30101 505 aaKnown RBP19.56■□□□□ 0.72
RER1-202ENST00000378512 ICAM3P32942 547 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 CCL23P55773 120 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 PPIGQ13427 754 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■□□□□ 10.2
RER1-202ENST00000378512 PCNX4Q63HM2 1172 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 XRRA1Q6P2D8 792 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 GPKOWQ92917 476 aaPredicted RBP eCLIP19.56■□□□□ 0.72
RER1-202ENST00000378512 CUL5Q93034 780 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 BARHL2Q9NY43 387 aa19.56■□□□□ 0.72
RER1-202ENST00000378512 STXBP3O00186 592 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 KPNA6O60684 536 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 MYCLP12524 364 aaPredicted RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 HOXD8P13378 290 aaPredicted RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 DNAJB2P25686 324 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 HEATR3Q7Z4Q2 680 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 TMEM199Q8N511 208 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 NOC4LQ9BVI4 516 aaKnown RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 WNT8AQ9H1J5 351 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 ALDH8A1Q9H2A2 487 aaPredicted RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 TRMT13Q9NUP7 481 aaKnown RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 CXXC1Q9P0U4 656 aaPredicted RBP19.55■□□□□ 0.72
RER1-202ENST00000378512 MRVI1Q9Y6F6 885 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 PRUNE2Q8WUY3 3088 aa19.55■□□□□ 0.72
RER1-202ENST00000378512 EIF5BO60841 1220 aaKnown RBP19.54■□□□□ 0.72
RER1-202ENST00000378512 SP2Q02086 613 aa19.54■□□□□ 0.72
RER1-202ENST00000378512 PKN1Q16512 942 aa19.54■□□□□ 0.72
RER1-202ENST00000378512 PFKFB3Q16875 520 aaPredicted RBP19.54■□□□□ 0.72
RER1-202ENST00000378512 BRDTQ58F21 947 aaPredicted RBP19.54■□□□□ 0.72
RER1-202ENST00000378512 VWCEQ96DN2 955 aa19.54■□□□□ 0.72
RER1-202ENST00000378512 ZNF274Q96GC6 653 aaPredicted RBP19.54■□□□□ 0.72
RER1-202ENST00000378512 UPF3BQ9BZI7 483 aaKnown RBP19.54■□□□□ 0.72
RER1-202ENST00000378512 RIC8AQ9NPQ8 531 aa19.54■□□□□ 0.72
RER1-202ENST00000378512 CHD9Q3L8U1 2897 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.53■□□□□ 0.72
RER1-202ENST00000378512 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.53■□□□□ 0.72
RER1-202ENST00000378512 PRPF3O43395 683 aaKnown RBP19.53■□□□□ 0.72
RER1-202ENST00000378512 MMP3P08254 477 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 CYP2C9P11712 490 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 IFNAR1P17181 557 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 GRIN2CQ14957 1233 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 MYSM1Q5VVJ2 828 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 SCLYQ96I15 445 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 MTG1Q9BT17 334 aaPredicted RBP19.53■□□□□ 0.72
RER1-202ENST00000378512 IL23AQ9NPF7 189 aa19.53■□□□□ 0.72
RER1-202ENST00000378512 SPATA31C2B4DYI2 1134 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 SEC24BO95487 1268 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 CLK2P49760 499 aaKnown RBP19.52■□□□□ 0.72
RER1-202ENST00000378512 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 LAMC2Q13753 1193 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 CELF3Q5SZQ8 465 aaKnown RBP19.52■□□□□ 0.72
RER1-202ENST00000378512 MAFAQ8NHW3 353 aaPredicted RBP19.52■□□□□ 0.72
RER1-202ENST00000378512 PPTC7Q8NI37 304 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 AFG1LQ8WV93 481 aa19.52■□□□□ 0.72
RER1-202ENST00000378512 RNF26Q9BY78 433 aaPredicted RBP19.52■□□□□ 0.72
RER1-202ENST00000378512 ESYT2A0FGR8 921 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 SCG2P13521 617 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
RER1-202ENST00000378512 NAPAP54920 295 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 UBE2SQ16763 222 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 GNPTABQ3T906 1256 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■■□ 20.2
RER1-202ENST00000378512 PBX4Q9BYU1 374 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 NAP1L2Q9ULW6 460 aaPredicted RBP19.51■□□□□ 0.71
RER1-202ENST00000378512 FIBPO43427 364 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 NBPF20Q3BBV1 942 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 NFRKBQ6P4R8 1299 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 PSRC1Q6PGN9 363 aaPredicted RBP19.51■□□□□ 0.71
RER1-202ENST00000378512 OTOP2Q7RTS6 562 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 KAT2BQ92831 832 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 TIFAQ96CG3 184 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 ZFP91Q96JP5 570 aaPredicted RBP19.51■□□□□ 0.71
RER1-202ENST00000378512 ZMYND12Q9H0C1 365 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 GLT8D2Q9H1C3 349 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 PDRG1Q9NUG6 133 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 PCDHA6Q9UN73 950 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 PCDHA8Q9Y5H6 950 aa19.51■□□□□ 0.71
RER1-202ENST00000378512 SMCO2A6NFE2 343 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 FOSP01100 380 aaPredicted RBP19.5■□□□□ 0.71
RER1-202ENST00000378512 FOSL2P15408 326 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 PTPN11Q06124 597 aaPredicted RBP19.5■□□□□ 0.71
RER1-202ENST00000378512 HSDL1Q3SXM5 330 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 FAM47CQ5HY64 1035 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 SESTD1Q86VW0 696 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 DHX37Q8IY37 1157 aaKnown RBP19.5■□□□□ 0.71
RER1-202ENST00000378512 HERVK_113Q902F9 699 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 PHKBQ93100 1093 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 SENP7Q9BQF6 1050 aa19.5■□□□□ 0.71
RER1-202ENST00000378512 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms