RNA–Protein interactions for RNA: ENST00000376687.3

SUV39H1-202, Transcript of suppressor of variegation 3-9 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUV39H1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUV39H1-202ENST00000376687 RASSF4Q9H2L5 321 aa18.39■□□□□ 0.53
SUV39H1-202ENST00000376687 CUEDC2Q9H467 287 aa18.39■□□□□ 0.53
SUV39H1-202ENST00000376687 LAMB2P55268 1798 aa18.38■□□□□ 0.53
SUV39H1-202ENST00000376687 MAGEA1P43355 309 aa18.38■□□□□ 0.53
SUV39H1-202ENST00000376687 ERGIC2Q96RQ1 377 aa18.38■□□□□ 0.53
SUV39H1-202ENST00000376687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.38■□□□□ 0.53
SUV39H1-202ENST00000376687 GYS1P13807 737 aa18.38■□□□□ 0.53
SUV39H1-202ENST00000376687 TNRC6CQ9HCJ0 1690 aaKnown RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 ATP2B4P23634 1241 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 POLR2FP61218 127 aaKnown RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 COASYQ13057 564 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 VPS72Q15906 364 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 GOLPH3Q9H4A6 298 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 PCDHA12Q9UN75 941 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 CREG2Q8IUH2 290 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 ZSCAN29Q8IWY8 852 aaPredicted RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 PSTPIP2Q9H939 334 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 PANK4Q9NVE7 773 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 CWC15Q9P013 229 aaKnown RBP18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
SUV39H1-202ENST00000376687 FTCDO95954 541 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 IL1R1P14778 569 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 LRRC55Q6ZSA7 311 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 LSM14BQ9BX40 385 aaKnown RBP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 ESYT3A0FGR9 886 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 ACTN1P12814 892 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 USH1GQ495M9 461 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 AFAP1L1Q8TED9 768 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 POTEFA5A3E0 1075 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 TACC1O75410 805 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 KRT18P05783 430 aaKnown RBP18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 POTEIP0CG38 1075 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 DDR1Q08345 913 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
SUV39H1-202ENST00000376687 ZSCAN5CA6NGD5 496 aaPredicted RBP18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 PLCG2P16885 1265 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 RBM5P52756 815 aaKnown RBP eCLIP18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 PSMC6P62333 389 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 MYOCDQ8IZQ8 938 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 PACSIN1Q9BY11 444 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 SH2D4AQ9H788 454 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 G3V3G9 751 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 TTLL1O95922 423 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 RETREG2Q8NC44 543 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 BAP1Q92560 729 aa18.35■□□□□ 0.53
SUV39H1-202ENST00000376687 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 FXR2P51116 673 aaKnown RBP eCLIP18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 CYP4A11Q02928 519 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 IKQ13123 557 aaPredicted RBP18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 RAPGEF1Q13905 1077 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 CCDC181Q5TID7 509 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 GPBP1Q86WP2 473 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 DNAJC19Q96DA6 116 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 OSBPL9Q96SU4 736 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 DBNDD1Q9H9R9 158 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 MAGEF1Q9HAY2 307 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 PNMA6FA0A0J9YX94 578 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 SHMT1P34896 483 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 CASP5P51878 434 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 KIAA0825Q8IV33 1275 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 GUF1Q8N442 669 aaKnown RBP18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 TSEN2Q8NCE0 465 aaKnown RBP18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 LAMB1P07942 1786 aa18.34■□□□□ 0.53
SUV39H1-202ENST00000376687 SFI1A8K8P3 1242 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 TLR2O60603 784 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 EHBP1Q8NDI1 1231 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 SPATA4Q8NEY3 305 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 ADAMTS1Q9UHI8 967 aa18.33■□□□□ 0.53
SUV39H1-202ENST00000376687 RREB1Q92766 1687 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 PABPC4Q13310 644 aaKnown RBP eCLIP18.33■□□□□ 0.523e-6■■□□□ 13.6
SUV39H1-202ENST00000376687 PRR16Q569H4 304 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 TBC1D5Q92609 795 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 CUL5Q93034 780 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 P2RX7Q99572 595 aaKnown RBP18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 TSG101Q99816 390 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 RAB34Q9BZG1 259 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 MED4Q9NPJ6 270 aa18.33■□□□□ 0.52
SUV39H1-202ENST00000376687 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms