RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 PRRC2BQ5JSZ5 2229 aaKnown RBP21.4■■□□□ 1.02
HDAC6-202ENST00000376610 PNMA6FA0A0J9YX94 578 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 PTH1RQ03431 593 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 RBL2Q08999 1139 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 PTK7Q13308 1070 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 SKIV2LQ15477 1246 aaKnown RBP21.4■■□□□ 1.02
HDAC6-202ENST00000376610 GNPTABQ3T906 1256 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 CELF3Q5SZQ8 465 aaKnown RBP21.4■■□□□ 1.02
HDAC6-202ENST00000376610 MYSM1Q5VVJ2 828 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 CNKSR3Q6P9H4 555 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 FCHSD1Q86WN1 690 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 CTAGE1Q96RT6 745 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 CERS4Q9HA82 394 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 MLXIPQ9HAP2 919 aa21.4■■□□□ 1.02
HDAC6-202ENST00000376610 E7EWF7 191 aa21.39■■□□□ 1.01
HDAC6-202ENST00000376610 EFCAB14O75071 495 aa21.39■■□□□ 1.01
HDAC6-202ENST00000376610 CKBP12277 381 aa21.39■■□□□ 1.01
HDAC6-202ENST00000376610 ARNTL2Q8WYA1 636 aa21.39■■□□□ 1.01
HDAC6-202ENST00000376610 HAS3O00219 553 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 SORBS3O60504 671 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 RGS20O76081 388 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 HOXD8P13378 290 aaPredicted RBP21.38■■□□□ 1.01
HDAC6-202ENST00000376610 UBA1P22314 1058 aaKnown RBP21.38■■□□□ 1.01
HDAC6-202ENST00000376610 WDR5P61964 334 aaKnown RBP21.38■■□□□ 1.01
HDAC6-202ENST00000376610 TROAPQ12815 778 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 AAK1Q2M2I8 961 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 ADAMTS19Q8TE59 1207 aa21.38■■□□□ 1.01
HDAC6-202ENST00000376610 DHX38Q92620 1227 aaKnown RBP21.38■■□□□ 1.01
HDAC6-202ENST00000376610 ABHD14A-ACY1A0A1B0GW23 586 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 NOP56O00567 594 aaKnown RBP21.37■■□□□ 1.01
HDAC6-202ENST00000376610 SGSM2O43147 1006 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 STAM2O75886 525 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 CXCL10P02778 98 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 TAP1Q03518 808 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 HSDL1Q3SXM5 330 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 IL31RAQ8NI17 732 aa21.37■■□□□ 1.01
HDAC6-202ENST00000376610 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
HDAC6-202ENST00000376610 TRANK1O15050 2925 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 EMSYQ7Z589 1322 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 RFXAPO00287 272 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 POU3F3P20264 500 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-202ENST00000376610 KIF5BP33176 963 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 IKBKEQ14164 716 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 CASC1Q6TDU7 716 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 PIBF1Q8WXW3 757 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 CUL5Q93034 780 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 UHRF1Q96T88 793 aaPredicted RBP21.36■■□□□ 1.01
HDAC6-202ENST00000376610 SENP2Q9HC62 589 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 MTCH2Q9Y6C9 303 aa21.36■■□□□ 1.01
HDAC6-202ENST00000376610 CYTH3O43739 400 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 NBNO60934 754 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 NEDD9Q14511 834 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 SLC35G1Q2M3R5 365 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 ZNF618Q5T7W0 954 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 RRP36Q96EU6 259 aaKnown RBP21.35■■□□□ 1.01
HDAC6-202ENST00000376610 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
HDAC6-202ENST00000376610 BDP1A6H8Y1 2624 aa21.35■■□□□ 1.01
HDAC6-202ENST00000376610 PTPRSQ13332 1948 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 C17orf102A2RUQ5 167 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 DDAH1O94760 285 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 SP2Q02086 613 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 GPNMBQ14956 572 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 SMARCC2Q8TAQ2 1214 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 MAP4K1Q92918 833 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 ZFP91Q96JP5 570 aaPredicted RBP21.34■■□□□ 1.01
HDAC6-202ENST00000376610 MAP3K14Q99558 947 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 MUC3AQ02505 3323 aa21.34■■□□□ 1.01
HDAC6-202ENST00000376610 H3BRB1 525 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 THPOP40225 353 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 DEFB103AP81534 67 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 ZNF200P98182 395 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-202ENST00000376610 MB21D2Q8IYB1 491 aaPredicted RBP21.33■■□□□ 1.01
HDAC6-202ENST00000376610 ATP6V0A1Q93050 837 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 RAD9AQ99638 391 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 C16orf70Q9BSU1 422 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 SPZ1Q9BXG8 430 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 USP26Q9BXU7 913 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 TUT1Q9H6E5 874 aaKnown RBP21.33■■□□□ 1.01
HDAC6-202ENST00000376610 RBM8AQ9Y5S9 174 aaKnown RBP21.33■■□□□ 1.01
HDAC6-202ENST00000376610 TAF6LQ9Y6J9 622 aa21.33■■□□□ 1.01
HDAC6-202ENST00000376610 EPOPA6NHQ4 379 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 RSPH10B2B2RC85 870 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 FIBPO43427 364 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 LGR5O75473 907 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 GJB5O95377 273 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 LGALS2P05162 132 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 RSPH10BP0C881 870 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 ICAM3P32942 547 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 GNAQP50148 359 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 ANTXR2P58335 489 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 TRIM71Q2Q1W2 868 aaKnown RBP21.32■■□□□ 1
HDAC6-202ENST00000376610 METTL7BQ6UX53 244 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 NFXL1Q6ZNB6 911 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 SERINC5Q86VE9 423 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 ZNF654Q8IZM8 581 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
HDAC6-202ENST00000376610 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 12e-6■■□□□ 12.7
HDAC6-202ENST00000376610 INPP4AQ96PE3 977 aaPredicted RBP21.32■■□□□ 1
HDAC6-202ENST00000376610 MTA3Q9BTC8 594 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms