RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 TMEM266Q2M3C6 531 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 ARHGEF16Q5VV41 709 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 CYP4F22Q6NT55 531 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 PLA2G4DQ86XP0 818 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 NSUN6Q8TEA1 469 aaKnown RBP11.81□□□□□ -0.52
PDPN-203ENST00000376061 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
PDPN-203ENST00000376061 AK8Q96MA6 479 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 UIMC1Q96RL1 719 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 ZIC5Q96T25 663 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 MMP19Q99542 508 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
PDPN-203ENST00000376061 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 MGAMO43451 1857 aa11.81□□□□□ -0.52
PDPN-203ENST00000376061 DNAJC25-GNG10A0A024R161 153 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 MEIS1O00470 390 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 ZNF202O95125 648 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 BCRP11274 1271 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 MYCLP12524 364 aaPredicted RBP11.8□□□□□ -0.52
PDPN-203ENST00000376061 CCND2P30279 289 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 TXLNAP40222 546 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 APLP1P51693 650 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 INHBEP58166 350 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
PDPN-203ENST00000376061 WDR78Q5VTH9 848 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 XRRA1Q6P2D8 792 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 SLFN12Q8IYM2 578 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 FAM133AQ8N9E0 248 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 DNERQ8NFT8 737 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 FGD4Q96M96 766 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 FAM20AQ96MK3 541 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
PDPN-203ENST00000376061 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 POLR2DO15514 142 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 ACTN4O43707 911 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 MARCH6O60337 910 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 NR3C2P08235 984 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 ARP10275 920 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 FCER1AP12319 257 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CDC25AP30304 524 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 GRM1Q13255 1194 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 KCTD2Q14681 263 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 RBM43Q6ZSC3 357 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 VSIG10LQ86VR7 867 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 PDILTQ8N807 584 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 TIGD1Q96MW7 591 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 PCDHA12Q9UN75 941 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 WDR81Q562E7 1941 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 SYCE3A1L190 88 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 PGK2P07205 417 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 EDNRBP24530 442 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 UBA7P41226 1012 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 TM4SF4P48230 202 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 ZNF445P59923 1031 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 NOGQ13253 232 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CRHR2Q13324 411 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 MTMR1Q13613 665 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 PDIA5Q14554 519 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 KARSQ15046 597 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 E2F4Q16254 413 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CAMK4Q16566 473 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 LONRF3Q496Y0 759 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 KRBA2Q6ZNG9 492 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CABP7Q86V35 215 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 DHX58Q96C10 678 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 IWS1Q96ST2 819 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 WDR11Q9BZH6 1224 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 AGO4Q9HCK5 861 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 ADD3Q9UEY8 706 aaKnown RBP11.79□□□□□ -0.52
PDPN-203ENST00000376061 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
PDPN-203ENST00000376061 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
PDPN-203ENST00000376061 CTAGE5O15320 804 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 GAS7O60861 476 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 AOC2O75106 756 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 PSMD10O75832 226 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 PDXDC2PQ6P474 469 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 ABRAQ8N0Z2 381 aa11.78□□□□□ -0.52
PDPN-203ENST00000376061 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
PDPN-203ENST00000376061 ZNF577Q9BSK1 485 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms