RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RBM28Q9NW13 759 aaKnown RBP14.3□□□□□ -0.12
MSH5-204ENST00000375755 FOCADQ5VW36 1801 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CCDC189A1A4V9 331 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 RASSF9O75901 435 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 SMTNP53814 917 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 ZNF658Q5TYW1 1059 aaPredicted RBP14.29□□□□□ -0.12
MSH5-204ENST00000375755 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 KDM7AQ6ZMT4 941 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 MICALCLQ6ZW33 695 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 RUBCNQ92622 972 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 FERMT2Q96AC1 680 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CEP95Q96GE4 821 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 TACO1Q9BSH4 297 aaKnown RBP14.29□□□□□ -0.12
MSH5-204ENST00000375755 STIM2Q9P246 746 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CAPN6Q9Y6Q1 641 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 KLK7P49862 253 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
MSH5-204ENST00000375755 HDLBPQ00341 1268 aaKnown RBP14.29□□□□□ -0.12
MSH5-204ENST00000375755 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 PSMB7Q99436 277 aa14.29□□□□□ -0.12
MSH5-204ENST00000375755 ZNF233A6NK53 670 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 ZNF263O14978 683 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
MSH5-204ENST00000375755 CALM1P0DP23 149 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 CALM2P0DP24 149 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 CALM3P0DP25 149 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 ITIH3Q06033 890 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 TCP10Q12799 353 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 PTGISQ16647 500 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 APOBEC3HQ6NTF7 200 aaKnown RBP14.28□□□□□ -0.12
MSH5-204ENST00000375755 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 KRT26Q7Z3Y9 468 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 N4BP2L2Q92802 583 aaPredicted RBP14.28□□□□□ -0.12
MSH5-204ENST00000375755 CENPHQ9H3R5 247 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 LRWD1Q9UFC0 647 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 H7C1D1 291 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
MSH5-204ENST00000375755 CXCR5P32302 372 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 IFT88Q13099 833 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 NFRKBQ6P4R8 1299 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 CCT8L2Q96SF2 557 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 TTYH3Q9C0H2 523 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 SLC40A1Q9NP59 571 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 ECE2O60344 883 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 KRT2P35908 639 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 VAV2P52735 878 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 DGKHQ86XP1 1220 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 MIEF2Q96C03 454 aa14.28□□□□□ -0.12
MSH5-204ENST00000375755 CCDC43Q96MW1 224 aaKnown RBP14.28□□□□□ -0.12
MSH5-204ENST00000375755 B4DLN1 442 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 PPP1R37O75864 691 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.12
MSH5-204ENST00000375755 FAM153BP0C7A2 387 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 SCG2P13521 617 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 AKR1B1P15121 316 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 FAM153CQ494X1 144 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 NLRP14Q86W24 1093 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 IQCKQ8N0W5 287 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 TNFRSF25Q93038 417 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 STK32BQ9NY57 414 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 FAM153AQ9UHL3 310 aa14.27□□□□□ -0.12
MSH5-204ENST00000375755 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.13
MSH5-204ENST00000375755 TMED8Q6PL24 325 aaPredicted RBP14.27□□□□□ -0.13
MSH5-204ENST00000375755 CCDC170Q8IYT3 715 aa14.27□□□□□ -0.13
MSH5-204ENST00000375755 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
MSH5-204ENST00000375755 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
MSH5-204ENST00000375755 ODF2LQ9ULJ1 636 aa14.27□□□□□ -0.13
MSH5-204ENST00000375755 MOCS3O95396 460 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 NR1D1P20393 614 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 NF2P35240 595 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 CRKP46108 304 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PTGDRQ13258 359 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 CCDC96Q2M329 555 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 CEP85LQ5SZL2 805 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PIK3AP1Q6ZUJ8 805 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 TRIM58Q8NG06 486 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 ZNHIT6Q9NWK9 470 aaKnown RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 PLEKP08567 350 aaPredicted RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
MSH5-204ENST00000375755 RBM5P52756 815 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH5-204ENST00000375755 NLRP5P59047 1200 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 GRM4Q14833 912 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 ADSSL1Q8N142 457 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 C7orf43Q8WVR3 580 aa14.26□□□□□ -0.13
MSH5-204ENST00000375755 PIK3R5Q8WYR1 880 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms