RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 RNF207Q6ZRF8 634 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 KCTD1Q719H9 257 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 DGLUCYQ7Z3D6 616 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 EFHBQ8N7U6 833 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 APBB2Q92870 758 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 RPGRIP1Q96KN7 1286 aa11.09□□□□□ -0.63
HLA-DOA-202ENST00000374813 MYO10Q9HD67 2058 aa11.08□□□□□ -0.63
HLA-DOA-202ENST00000374813 LINC01565O15544 149 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 PRDM1O75626 825 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 MMP1P03956 469 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 GTF2F1P35269 517 aaKnown RBP eCLIP11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 PSEN2P49810 448 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 SNAP25P60880 206 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 NAALADL2Q58DX5 795 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 CCDC62Q6P9F0 684 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 ZBTB33Q86T24 672 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 RHPN1Q8TCX5 695 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 CLP1Q92989 425 aaKnown RBP11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 STRBPQ96SI9 672 aaKnown RBP11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 ALG1Q9BT22 464 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 PUS7LQ9H0K6 701 aaKnown RBP11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 IL1RAPL2Q9NP60 686 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 EXOC6BQ9Y2D4 811 aa11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 USP15Q9Y4E8 981 aaPredicted RBP11.08□□□□□ -0.64
HLA-DOA-202ENST00000374813 PLIN4Q96Q06 1357 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 MED19A0JLT2 244 aaPredicted RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 FSD2A1L4K1 749 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 GSG1L2A8MUP6 293 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 NFIBO00712 420 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 RPS6P62753 249 aaKnown RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 MFSD10Q14728 455 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 LY6KQ17RY6 165 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 SERINC5Q86VE9 423 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 UBALD2Q8IYN6 164 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 TMEM57Q8N5G2 664 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 P2RX5Q93086 422 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 EMID1Q96A84 441 aaPredicted RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 ATG2AQ2TAZ0 1938 aa11.07□□□□□ -0.64
HLA-DOA-202ENST00000374813 CHD6Q8TD26 2715 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 HAS3O00219 553 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 CAND2O75155 1236 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 ARIH2O95376 493 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 F2P00734 622 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 ATP5JP18859 108 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 GNAT2P19087 354 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 TDO2P48775 406 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 TFAP4Q01664 338 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 LAMC2Q13753 1193 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 PUM1Q14671 1186 aaKnown RBP eCLIP11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 WNT8BQ93098 351 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 CHMP4CQ96CF2 233 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 KIF1BPQ96EK5 621 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 HAUS7Q99871 368 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 MAF1Q9H063 256 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 STX8Q9UNK0 236 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 CEP250Q9BV73 2442 aa11.06□□□□□ -0.64
HLA-DOA-202ENST00000374813 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 MYH7P12883 1935 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 APPP05067 770 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 ZNF200P98182 395 aaPredicted RBP11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 CAMK1Q14012 370 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 STXBP2Q15833 593 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 ASTLQ6HA08 431 aaPredicted RBP11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 BTNL9Q6UXG8 535 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 SLC30A10Q6XR72 485 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 SEPT14Q6ZU15 432 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 PPTC7Q8NI37 304 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 DCAF4Q8WV16 495 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 RMDN1Q96DB5 314 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 SEMA4AQ9H3S1 761 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
HLA-DOA-202ENST00000374813 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 NRIP1P48552 1158 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 CLCN5P51795 746 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 MTMR3Q13615 1198 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 BTG3Q14201 252 aaPredicted RBP11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 TMEM105Q8N8V8 129 aa11.04□□□□□ -0.64
HLA-DOA-202ENST00000374813 CLEC4DQ8WXI8 215 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms