RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 B4DLN1 442 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 HAS3O00219 553 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 RFXAPO00287 272 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 GGPS1O95749 300 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 UBA1P22314 1058 aaKnown RBP16.51■□□□□ 0.23
UBXN11-207ENST00000374223 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
UBXN11-207ENST00000374223 ADCK5Q3MIX3 580 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
UBXN11-207ENST00000374223 DHX37Q8IY37 1157 aaKnown RBP16.51■□□□□ 0.23
UBXN11-207ENST00000374223 ANO2Q9NQ90 1003 aa16.51■□□□□ 0.23
UBXN11-207ENST00000374223 XIRP2A4UGR9 3374 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 MEIS2O14770 477 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 KPNA6O60684 536 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 MFSD10Q14728 455 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
UBXN11-207ENST00000374223 TRAF7Q6Q0C0 670 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 PPM1EQ8WY54 764 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
UBXN11-207ENST00000374223 MAF1Q9H063 256 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 SLC28A3Q9HAS3 691 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 MUC3AQ02505 3323 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 SIP14410 1827 aa16.5■□□□□ 0.23
UBXN11-207ENST00000374223 SUPT20HL2P0C7V6 817 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 CPA1P15085 419 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
UBXN11-207ENST00000374223 MBTPS1Q14703 1052 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
UBXN11-207ENST00000374223 UBE2SQ16763 222 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 KIAA0753Q2KHM9 967 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 TRIM71Q2Q1W2 868 aaKnown RBP16.49■□□□□ 0.23
UBXN11-207ENST00000374223 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
UBXN11-207ENST00000374223 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 C16orf70Q9BSU1 422 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 SPZ1Q9BXG8 430 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 CERS4Q9HA82 394 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 SLC4A7Q9Y6M7 1214 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 FRMPD4Q14CM0 1322 aa16.49■□□□□ 0.23
UBXN11-207ENST00000374223 EPOPA6NHQ4 379 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 NBNO60934 754 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 DDAH1O94760 285 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 F2P00734 622 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 HOXD8P13378 290 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-207ENST00000374223 CCND2P30279 289 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 MCM5P33992 734 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 PTPN11Q06124 597 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-207ENST00000374223 LAMC2Q13753 1193 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 DGKDQ16760 1214 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 NFXL1Q6ZNB6 911 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 SESTD1Q86VW0 696 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 SPATA33Q96N06 139 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 PRRC2BQ5JSZ5 2229 aaKnown RBP16.48■□□□□ 0.23
UBXN11-207ENST00000374223 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 LOXHD1Q8IVV2 1947 aa16.48■□□□□ 0.23
UBXN11-207ENST00000374223 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 CKBP12277 381 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 IGFBP4P22692 258 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 CCDC85BQ15834 202 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 TRIM50Q86XT4 487 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 FTOQ9C0B1 505 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 MAP3K20Q9NYL2 800 aaKnown RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
UBXN11-207ENST00000374223 COL4A4P53420 1690 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-207ENST00000374223 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 PITPNM1O00562 1244 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 ATP9AO75110 1047 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 PFKMP08237 780 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 ATP2A2P16615 1042 aaKnown RBP16.46■□□□□ 0.23
UBXN11-207ENST00000374223 DEFB103AP81534 67 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
UBXN11-207ENST00000374223 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 KRT40Q6A162 431 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
UBXN11-207ENST00000374223 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 RRP36Q96EU6 259 aaKnown RBP16.46■□□□□ 0.23
UBXN11-207ENST00000374223 TMEM87BQ96K49 555 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 MAP3K14Q99558 947 aa16.46■□□□□ 0.23
UBXN11-207ENST00000374223 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 SPATA31C2B4DYI2 1134 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 LGALS2P05162 132 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 CA3P07451 260 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 LIFRP42702 1097 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 SP4Q02446 784 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 PPP2R2DQ66LE6 453 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 LRRC8DQ7L1W4 858 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 ADAMTS19Q8TE59 1207 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms