RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 BMP15O95972 392 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 PGK2P07205 417 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 CCNA1P78396 465 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 LRMPQ12912 555 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 LRRC8AQ8IWT6 810 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 CACTINQ8WUQ7 758 aaKnown RBP16.07■□□□□ 0.16
HMGA1-203ENST00000374116 IMPACTQ9P2X3 320 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 BRCA2P51587 3418 aa16.07■□□□□ 0.16
HMGA1-203ENST00000374116 FDX1P10109 184 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 OAZ1P54368 228 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 PNOCQ13519 176 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 NCAPHQ15003 741 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 WWC2Q6AWC2 1192 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 PLXNB2O15031 1838 aa16.06■□□□□ 0.16
HMGA1-203ENST00000374116 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
HMGA1-203ENST00000374116 CAPN15O75808 1086 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 FCGRTP55899 365 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 GSDMDP57764 484 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-203ENST00000374116 PRKCZQ05513 592 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 GRIN1Q05586 938 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
HMGA1-203ENST00000374116 KIF22Q14807 665 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 CLEC4DQ8WXI8 215 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 OPLAHO14841 1288 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 SLC25A27O95847 323 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 TNNT1P13805 278 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 MAPK4P31152 587 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-203ENST00000374116 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
HMGA1-203ENST00000374116 M0R2N6 131 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 WNT7AO00755 349 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 ADAMTS3O15072 1205 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 ADORA2AP29274 412 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
HMGA1-203ENST00000374116 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 FERMT2Q96AC1 680 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 MMP19Q99542 508 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 ACAD9Q9H845 621 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
HMGA1-203ENST00000374116 PCDHA5Q9Y5H7 936 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
HMGA1-203ENST00000374116 POLR2DO15514 142 aaKnown RBP16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CYP2B6P20813 491 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 HOXA13P31271 388 aaPredicted RBP16.03■□□□□ 0.16
HMGA1-203ENST00000374116 FLT3LGP49771 235 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 MYL5Q02045 173 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 POSTNQ15063 836 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 MROH8Q9H579 483 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 KCND1Q9NSA2 647 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 COBLO75128 1261 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CFBP00751 764 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 FCER1AP12319 257 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 ATP2B1P20020 1258 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CALML3P27482 149 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 NLRP5P59047 1200 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 ISM2Q6H9L7 571 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 DAGLBQ8NCG7 672 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 SHCBP1Q8NEM2 672 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 XPO4Q9C0E2 1151 aaKnown RBP16.03■□□□□ 0.16
HMGA1-203ENST00000374116 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
HMGA1-203ENST00000374116 STXBP3O00186 592 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 SMC2O95347 1197 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 CYP2C19P33261 490 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 NAPAP54920 295 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.16
HMGA1-203ENST00000374116 KCTD2Q14681 263 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 TRIML1Q8N9V2 468 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 CHST13Q8NET6 341 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 SERTAD1Q9UHV2 236 aa16.02■□□□□ 0.16
HMGA1-203ENST00000374116 ABCB11O95342 1321 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 VGLL3A8MV65 326 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 CBFA2T2O43439 604 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 CAPN2P17655 700 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
HMGA1-203ENST00000374116 RPS6P62753 249 aaKnown RBP16.01■□□□□ 0.15
HMGA1-203ENST00000374116 FANCCQ00597 558 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 CCL14Q16627 93 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 UBE2SQ16763 222 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 KMT5BQ4FZB7 885 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 MORN1Q5T089 497 aa16.01■□□□□ 0.15
HMGA1-203ENST00000374116 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms