RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 BZW1Q7L1Q6 419 aaKnown RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 SIX6OS1Q8N1H7 587 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 PIGSQ96S52 555 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 ZNF341Q9BYN7 854 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 HOXD10P28358 340 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 SCRN1Q12765 414 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 RFX6Q8HWS3 928 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 GPATCH11Q8N954 259 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 PDXDC2PQ6P474 469 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
PHACTR4-202ENST00000373839 CARMIL3Q8ND23 1372 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ARL13BQ3SXY8 428 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 PPP2R2CQ9Y2T4 447 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ERVK-7P63135 1459 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 MCF2LO15068 1137 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 GPC4O75487 556 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 MCPH1Q8NEM0 835 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 RNF139Q8WU17 664 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 PALD1Q9ULE6 856 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ANGPTL3Q9Y5C1 460 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 MMP1P03956 469 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 MXI1P50539 228 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 DNAJC24Q6P3W2 148 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 C4orf50Q6ZRC1 276 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 TOPORSQ9NS56 1045 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 SORBS3O60504 671 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 CYP21A2P08686 494 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 MAPK4P31152 587 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ECE1P42892 770 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 SH3BGRP55822 239 aaPredicted RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 ZNF653Q96CK0 615 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 LMCD1Q9NZU5 365 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 OVOS2A0A0J9YW53 1432 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 OVOS2Q6IE36 1432 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 INHBAP08476 426 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 PIGBQ92521 554 aa12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
PHACTR4-202ENST00000373839 RCAN1P53805 252 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 YWHAGP61981 247 aaKnown RBP eCLIP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 TFAMQ00059 246 aaKnown RBP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 PDE1BQ01064 536 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 SDCCAG3Q96C92 435 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 FANCLQ9NW38 375 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 MAD1L1Q9Y6D9 718 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 SPATA31A3Q5VYP0 1347 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 KIF3CO14782 793 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 ELF2Q15723 593 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 LCORLQ8N3X6 602 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 MYRIPQ8NFW9 859 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 ROBO2Q9HCK4 1378 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 RNF207Q6ZRF8 634 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 CALR3Q96L12 384 aaKnown RBP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 RASSF4Q9H2L5 321 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 ARAP3Q8WWN8 1544 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 M0R2C6 588 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 DBN1Q16643 649 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 HDAC11Q96DB2 347 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 MXD3Q9BW11 206 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 FEM1BQ9UK73 627 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 EFCAB8A8MWE9 144 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 CCNE1P24864 410 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 CDK8P49336 464 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 LRRC63Q05C16 580 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 MTERF2Q49AM1 385 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 PI4K2BQ8TCG2 481 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 PCDHA5Q9Y5H7 936 aa12.03□□□□□ -0.48
PHACTR4-202ENST00000373839 SYNMO15061 1565 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms