RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 NCAPGQ9BPX3 1015 aa10.78□□□□□ -0.68
CSMD2-203ENST00000373377 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
CSMD2-203ENST00000373377 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
CSMD2-203ENST00000373377 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
CSMD2-203ENST00000373377 DLEC1Q9Y238 1755 aa10.78□□□□□ -0.68
CSMD2-203ENST00000373377 NID2Q14112 1375 aa10.77□□□□□ -0.68
CSMD2-203ENST00000373377 FRMPD2Q68DX3 1309 aaPredicted RBP10.77□□□□□ -0.68
CSMD2-203ENST00000373377 MYMKA6NI61 221 aa10.77□□□□□ -0.68
CSMD2-203ENST00000373377 PAK2Q13177 524 aa10.77□□□□□ -0.68
CSMD2-203ENST00000373377 TGFBRAP1Q8WUH2 860 aa10.77□□□□□ -0.68
CSMD2-203ENST00000373377 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.68
CSMD2-203ENST00000373377 MAST2Q6P0Q8 1798 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 RAD51CO43502 376 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 USP8P40818 1118 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 TNNI2P48788 182 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 CDR1P51861 262 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 PRPF4BQ13523 1007 aaKnown RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 NONOQ15233 471 aaKnown RBP eCLIP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 E2F5Q15329 346 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 NSUN4Q96CB9 384 aaKnown RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 GPR101Q96P66 508 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 CCT8L2Q96SF2 557 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 DPH5Q9H2P9 285 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 MEFVO15553 781 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 CRKLP46109 303 aaKnown RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 SLC9C1Q4G0N8 1177 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 SFMBT2Q5VUG0 894 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 ALS2CLQ60I27 953 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 SPTY2D1Q68D10 685 aaPredicted RBP10.77□□□□□ -0.69
CSMD2-203ENST00000373377 SNX29Q8TEQ0 813 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 COA7Q96BR5 231 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 CABS1Q96KC9 395 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 NUDT12Q9BQG2 462 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
CSMD2-203ENST00000373377 CACNA1SQ13698 1873 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 MAN2A1Q16706 1144 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 SLC35G1Q2M3R5 365 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 NLRP14Q86W24 1093 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 UHMK1Q8TAS1 419 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 PURBQ96QR8 312 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 ERGIC2Q96RQ1 377 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 SH3GL2Q99962 352 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 CCSER1Q9C0I3 900 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 DDX47Q9H0S4 455 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 SEC63Q9UGP8 760 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 TNRC6CQ9HCJ0 1690 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 TLDC2A0PJX2 215 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 PPP1R37O75864 691 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 TDP2O95551 362 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 KRT18P05783 430 aaKnown RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 TCERG1LQ5VWI1 586 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
CSMD2-203ENST00000373377 GIMAP7Q8NHV1 300 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 PIGSQ96S52 555 aa10.76□□□□□ -0.69
CSMD2-203ENST00000373377 A0A087X0T9 212 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 STXBP3O00186 592 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 FAM228BP0C875 321 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 ACTN1P12814 892 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CALCRLQ16602 461 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 TMED8Q6PL24 325 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CCDC121Q6ZUS5 278 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 NEK8Q86SG6 692 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 TXNRD3Q86VQ6 643 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 KIRREL3Q8IZU9 778 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 DDX12PQ92771 950 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 TSG101Q99816 390 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 MAD2L2Q9UI95 211 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 MINPP1Q9UNW1 487 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 SIK3Q9Y2K2 1263 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 NPHP3-ACAD11A0A0J9YXS1 232 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 HGSO14964 777 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 FAM83BQ5T0W9 1011 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 MICALCLQ6ZW33 695 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 EPN3Q9H201 632 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 LAMB1P07942 1786 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 GCOM1H8Y6P7 765 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 MYZAPP0CAP1 466 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 HIBADHP31937 336 aaKnown RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 ITPK1Q13572 414 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 PTGISQ16647 500 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 PDXDC1Q6P996 788 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 KCNK18Q7Z418 384 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
CSMD2-203ENST00000373377 SPAG5Q96R06 1193 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CCDC113Q9H0I3 377 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CXorf56Q9H5V9 222 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 CCDC87Q9NVE4 849 aa10.75□□□□□ -0.69
CSMD2-203ENST00000373377 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms