RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 HDAC6Q9UBN7 1215 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 PCDHAC2Q9Y5I4 1007 aa7.15□□□□□ -1.27
CHD6-202ENST00000373222 ZNF831Q5JPB2 1677 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 ERICH4A6NGS2 130 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 RASSF10A6NK89 507 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 FAM196BA6NMK8 535 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 B4DLN1 442 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L15C9J2P7 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L10C9JJH3 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L13C9JLJ4 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L11C9JVI0 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L18D6R9N7 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L22D6RA61 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L17D6RBQ6 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L19D6RCP7 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L20D6RJB6 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 POLR3GO15318 223 aaPredicted RBP7.14□□□□□ -1.27
CHD6-202ENST00000373222 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 PARP1P09874 1014 aaKnown RBP7.14□□□□□ -1.27
CHD6-202ENST00000373222 PCP11498 1178 aaKnown RBP7.14□□□□□ -1.27
CHD6-202ENST00000373222 KRT9P35527 623 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 ARHGAP25P42331 645 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 KCNC4Q03721 635 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP17L24Q0WX57 530 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 CCDC178Q5BJE1 867 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 TRAPPC3LQ5T215 181 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 DGKHQ86XP1 1220 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 TEX11Q8IYF3 940 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 PNKPQ96T60 521 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 NUDT12Q9BQG2 462 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 PARD6BQ9BYG5 372 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 RWDD2AQ9UIY3 292 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 USP21Q9UK80 565 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 LY75O60449 1722 aa7.14□□□□□ -1.27
CHD6-202ENST00000373222 CCDC189A1A4V9 331 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 RCCD1A6NED2 376 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SMCO2A6NFE2 343 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 MYO1BO43795 1136 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SLC37A4O43826 429 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TAL1P17542 331 aaPredicted RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 UBA7P41226 1012 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 ATP2B2Q01814 1243 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 VPS72Q15906 364 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 NCAPH2Q6IBW4 605 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 WDR59Q6PJI9 974 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 ZNF771Q7L3S4 317 aaPredicted RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 RSRC2Q7L4I2 434 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 ADSSL1Q8N142 457 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TBCKQ8TEA7 893 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 UPF1Q92900 1129 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD6-202ENST00000373222 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 MMTAG2Q9BU76 263 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 DDX4Q9NQI0 724 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 LIMA1Q9UHB6 759 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 DUSP10Q9Y6W6 482 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 MYH4Q9Y623 1939 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 PDS5AQ29RF7 1337 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 UBR3Q6ZT12 1888 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 EFCAB8A8MWE9 144 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SRGAP2O75044 1071 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TDP2O95551 362 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 BMP15O95972 392 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 P4HBP07237 508 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 PLEKP08567 350 aaPredicted RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 RHOXF2BP0C7M4 288 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SLC16A2P36021 539 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 LONP1P36776 959 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 TXKP42681 527 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TRAPPC10P48553 1259 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SCNN1DP51172 638 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 GTF2IP78347 998 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 COL19A1Q14993 1142 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TERF2Q15554 542 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 UBE2SQ16763 222 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 RC3H1Q5TC82 1133 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 TTBK2Q6IQ55 1244 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 DYMQ7RTS9 669 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 KCNK18Q7Z418 384 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 PTCD2Q8WV60 388 aaKnown RBP7.13□□□□□ -1.27
CHD6-202ENST00000373222 JDP2Q8WYK2 163 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 TRIM47Q96LD4 638 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 RHOXF2Q9BQY4 288 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 SLC39A2Q9NP94 309 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 KCNQ5Q9NR82 932 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 RNF19AQ9NV58 838 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 DCTN4Q9UJW0 460 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 GUCA1BQ9UMX6 200 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 ARFGEF1Q9Y6D6 1849 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 NHSQ6T4R5 1651 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 ROBO3Q96MS0 1386 aa7.13□□□□□ -1.27
CHD6-202ENST00000373222 LRRC10BA6NIK2 292 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 EPHB6O15197 1021 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CCP110O43303 1012 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 GYS1P13807 737 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 AKR1B1P15121 316 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CALML3P27482 149 aa7.12□□□□□ -1.27
CHD6-202ENST00000373222 CACNB3P54284 484 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms