RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 CTDSPL2Q05D32 466 aa18.45■□□□□ 0.54
TRAPPC3-203ENST00000373163 SEPT8Q92599 483 aa18.45■□□□□ 0.54
TRAPPC3-203ENST00000373163 EMID1Q96A84 441 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-203ENST00000373163 FAM86C1Q9NVL1 165 aa18.45■□□□□ 0.54
TRAPPC3-203ENST00000373163 TBX10O75333 385 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 TOP1P11387 765 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 CTNNB1P35222 781 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 HIC1Q14526 733 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 FBXL6Q8N531 539 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 RGS22Q8NE09 1264 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 PPTC7Q8NI37 304 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 GPATCH3Q96I76 525 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 C11orf84Q9BUA3 381 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 IFIH1Q9BYX4 1025 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 LMAN2LQ9H0V9 348 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 CD207Q9UJ71 328 aa18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-203ENST00000373163 C5orf67F2Z3F1 127 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 PDHBP11177 359 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 LAMC2Q13753 1193 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 STXBP2Q15833 593 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 USH1GQ495M9 461 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 SERINC5Q86VE9 423 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
TRAPPC3-203ENST00000373163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 GRM6O15303 877 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 RB1P06400 928 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 MS4A1P11836 297 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 GTF2F1P35269 517 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 ZXDAP98168 799 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 FIBCD1Q8N539 461 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 TAAR1Q96RJ0 339 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 IGFLR1Q9H665 355 aa18.42■□□□□ 0.54
TRAPPC3-203ENST00000373163 LINC01565O15544 149 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 ZNF543Q08ER8 600 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 SYTL5Q8TDW5 730 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 IL17RAQ96F46 866 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 IRF2BPLQ9H1B7 796 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 MRVI1Q9Y6F6 885 aa18.41■□□□□ 0.54
TRAPPC3-203ENST00000373163 USP34Q70CQ2 3546 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 FOXP2O15409 715 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 ORC4O43929 436 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 CSPG5O95196 566 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 HOXD8P13378 290 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 BMPR1AP36894 532 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 NDUFV1P49821 464 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 ATOH1Q92858 354 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 RMDN3Q96TC7 470 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 ALG13Q9NP73 1137 aaKnown RBP18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 RWDD3Q9Y3V2 267 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 TECTAO75443 2155 aa18.4■□□□□ 0.54
TRAPPC3-203ENST00000373163 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 EYA4O95677 639 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 CTSHP09668 335 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 LINC00271P0C7V0 271 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 VCPP55072 806 aaKnown RBP18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 ZMYM1Q5SVZ6 1142 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 TBC1D5Q92609 795 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 ATP6V0A1Q93050 837 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 MAF1Q9H063 256 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 TOMM22Q9NS69 142 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 ANAPC4Q9UJX5 808 aa18.39■□□□□ 0.53
TRAPPC3-203ENST00000373163 C17orf102A2RUQ5 167 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 LOC730098B7Z3J9 87 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 EIF3JO75822 258 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 MMP1P03956 469 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 SIGLEC14Q08ET2 396 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 ADAM15Q13444 863 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 RRP12Q5JTH9 1297 aaKnown RBP18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 APBB2Q92870 758 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
TRAPPC3-203ENST00000373163 CAND2O75155 1236 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 FGRP09769 529 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 EIF2AK2P19525 551 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 HSDL1Q3SXM5 330 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 SPATA33Q96N06 139 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 FSD1Q9BTV5 496 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 TCP11L1Q9NUJ3 509 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 ABCB11O95342 1321 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 ADGRA3Q8IWK6 1321 aa18.37■□□□□ 0.53
TRAPPC3-203ENST00000373163 SORBS3O60504 671 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 AVPR2P30518 371 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 HOXC8P31273 242 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 CBX2Q14781 532 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 CDC37Q16543 378 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 MYSM1Q5VVJ2 828 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 MCF2L2Q86YR7 1114 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 SMRP1Q8NCR6 262 aa18.36■□□□□ 0.53
TRAPPC3-203ENST00000373163 CLP1Q92989 425 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms