RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 USP17L12C9JPN9 530 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 USP17L21D6R901 530 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 HARSP12081 509 aaKnown RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 ANLNQ9NQW6 1124 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 BZW2Q9Y6E2 419 aaKnown RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 SCINQ9Y6U3 715 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 TRIM37O94972 964 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 ECEL1O95672 775 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 SERPING1P05155 500 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 MAN1A1P33908 653 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 LPIN2Q92539 896 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 L1RE1Q9UN81 338 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 TMOD1P28289 359 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 LAMB3Q13751 1172 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 KAZNQ674X7 775 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 PPP4R1Q8TF05 950 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 NSMCE1Q8WV22 266 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 EXOC5O00471 708 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 SH2B2O14492 632 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 GYG2O15488 501 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 IFNAR1P17181 557 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.21
GPC4-201ENST00000370828 CCDC14Q49A88 953 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 ARHGAP18Q8N392 663 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 SEC16BQ96JE7 1060 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
GPC4-201ENST00000370828 NAP1L4Q99733 375 aaKnown RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 ARIH1Q9Y4X5 557 aaPredicted RBP13.76□□□□□ -0.21
GPC4-201ENST00000370828 SASH3O75995 380 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
GPC4-201ENST00000370828 BASP1P80723 227 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 CYB5D1Q6P9G0 228 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 MYLK4Q86YV6 388 aaPredicted RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 GJA10Q969M2 543 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 CYFIP2Q96F07 1278 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 PUS3Q9BZE2 481 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 SMARCAL1Q9NZC9 954 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 MYOM2P54296 1465 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 CCDC188H7C350 402 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 PHEXP78562 749 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 ANAPC5Q9UJX4 755 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 A0A0G2JND7 137 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 GFM2Q969S9 779 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 SGSM3Q96HU1 749 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 RNPC3Q96LT9 517 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 NT5C3AQ9H0P0 336 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 STXBP3O00186 592 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 LMNAP02545 664 aaKnown RBP13.75□□□□□ -0.21
GPC4-201ENST00000370828 KCNA4P22459 653 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 RASGRP2Q7LDG7 609 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 OR2W6PQ8NHA6 318 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 RSAD2Q8WXG1 361 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 ZIM3Q96PE6 472 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 ABCC10Q5T3U5 1492 aa13.75□□□□□ -0.21
GPC4-201ENST00000370828 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
GPC4-201ENST00000370828 SLC44A4Q53GD3 710 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 NXNQ6DKJ4 435 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 ALKBH5Q6P6C2 394 aaKnown RBP13.74□□□□□ -0.21
GPC4-201ENST00000370828 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 KIFC2Q96AC6 838 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
GPC4-201ENST00000370828 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 KIF28PB7ZC32 967 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 GFPT2O94808 682 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 NR2F2P24468 414 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 ERFP50548 548 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 EXOC1LA0A1B0GW35 172 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 LRRC53A6NM62 1247 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 DCTN3O75935 186 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 CACNB1Q02641 598 aaPredicted RBP13.74□□□□□ -0.21
GPC4-201ENST00000370828 SRRM1Q8IYB3 904 aaKnown RBP13.74□□□□□ -0.21
GPC4-201ENST00000370828 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 ATP2A3Q93084 1043 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 IL25Q9H293 177 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 NOD2Q9HC29 1040 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
GPC4-201ENST00000370828 PRCPP42785 496 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms