RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 KMT5BQ4FZB7 885 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 RPS6KC1Q96S38 1066 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 EMILIN3Q9NT22 766 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 CDC23Q9UJX2 597 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 ZNF148Q9UQR1 794 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 AFG3L2Q9Y4W6 797 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 TRIM11Q96F44 468 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 EPSTI1Q96J88 318 aa21.42■■□□□ 1.02
LMO4-202ENST00000370544 ZNF277Q9NRM2 450 aaPredicted RBP21.42■■□□□ 1.02
LMO4-202ENST00000370544 ALKQ9UM73 1620 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 XPOTO43592 962 aaKnown RBP21.41■■□□□ 1.02
LMO4-202ENST00000370544 RINT1Q6NUQ1 792 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 SAMSN1Q9NSI8 373 aaKnown RBP21.41■■□□□ 1.02
LMO4-202ENST00000370544 ENC1O14682 589 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 MMP10P09238 476 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 GNGT1P63211 74 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 ARL6IP4Q66PJ3 421 aaKnown RBP21.41■■□□□ 1.02
LMO4-202ENST00000370544 CAPN12Q6ZSI9 719 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 TBC1D10CQ8IV04 446 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 NME8Q8N427 588 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 CFAP57Q96MR6 1250 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 CYP2E1P05181 493 aaPredicted RBP21.41■■□□□ 1.02
LMO4-202ENST00000370544 TROVE2P10155 538 aaKnown RBP eCLIP21.41■■□□□ 1.02
LMO4-202ENST00000370544 CCNE1P24864 410 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 RILPQ96NA2 401 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 RUNDC3BQ96NL0 473 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 NEDD4P46934 1319 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 COL15A1P39059 1388 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
LMO4-202ENST00000370544 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 EXOC8Q8IYI6 725 aa21.41■■□□□ 1.02
LMO4-202ENST00000370544 GUCY2DQ02846 1103 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 NARFQ9UHQ1 456 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 CDHR2Q9BYE9 1310 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 PARVGQ9HBI0 331 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 A6NJR5 290 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 ABCD1P33897 745 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 TOB2Q14106 344 aaPredicted RBP21.4■■□□□ 1.02
LMO4-202ENST00000370544 ZNF653Q96CK0 615 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 SYNJ2BP-COX16A0A087WUM0 186 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
LMO4-202ENST00000370544 TMEM179Q6ZVK1 233 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 PNMA8AQ86V59 439 aaPredicted RBP21.4■■□□□ 1.02
LMO4-202ENST00000370544 COX16Q9P0S2 106 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 GCNT4Q9P109 453 aa21.4■■□□□ 1.02
LMO4-202ENST00000370544 OATP04181 439 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 ITKQ08881 620 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 SLFNL1Q499Z3 407 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 MAP7D3Q8IWC1 876 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 MINPP1Q9UNW1 487 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 LRRN2O75325 713 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 TAB3Q8N5C8 712 aaPredicted RBP21.39■■□□□ 1.02
LMO4-202ENST00000370544 FAM81BQ96LP2 452 aa21.39■■□□□ 1.02
LMO4-202ENST00000370544 CYP2D6P10635 497 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.01
LMO4-202ENST00000370544 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 FAM133AQ8N9E0 248 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 RIPOR2Q9Y4F9 1068 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 SNAP25P60880 206 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
LMO4-202ENST00000370544 PSAPP07602 524 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 AP5M1Q9H0R1 490 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 H7C0C1 242 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 BUB1BO60566 1050 aaPredicted RBP21.38■■□□□ 1.01
LMO4-202ENST00000370544 PCK1P35558 622 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 ATP5OP48047 213 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 MTERF2Q49AM1 385 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 RFX6Q8HWS3 928 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 UHMK1Q8TAS1 419 aaKnown RBP21.38■■□□□ 1.01
LMO4-202ENST00000370544 DCAF4Q8WV16 495 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 NUB1Q9Y5A7 615 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 RSPH3Q86UC2 560 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 VSTM4Q8IW00 320 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 PPP4R1Q8TF05 950 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 TACC3Q9Y6A5 838 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 LAMC1P11047 1609 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
LMO4-202ENST00000370544 MAPK4P31152 587 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 PTPN22Q9Y2R2 807 aa21.38■■□□□ 1.01
LMO4-202ENST00000370544 TMED8Q6PL24 325 aaPredicted RBP21.37■■□□□ 1.01
LMO4-202ENST00000370544 RABGGTAQ92696 567 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 TNS3Q68CZ2 1445 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 PRDX5P30044 214 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 ATP1A2P50993 1020 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 TTBK2Q6IQ55 1244 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 CACTINQ8WUQ7 758 aaKnown RBP21.37■■□□□ 1.01
LMO4-202ENST00000370544 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 CRKP46108 304 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 GFPT2O94808 682 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 RESP18Q5W5W9 173 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 HINFPQ9BQA5 517 aa21.37■■□□□ 1.01
LMO4-202ENST00000370544 LMNB2Q03252 620 aa21.36■■□□□ 1.01
LMO4-202ENST00000370544 CTTNQ14247 550 aaKnown RBP21.36■■□□□ 1.01
LMO4-202ENST00000370544 SYNE4Q8N205 404 aa21.36■■□□□ 1.01
LMO4-202ENST00000370544 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
LMO4-202ENST00000370544 VCX3BQ9H321 246 aa21.36■■□□□ 1.01
LMO4-202ENST00000370544 UBE2TQ9NPD8 197 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms