RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
COL9A1-204ENST00000370496 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
COL9A1-204ENST00000370496 DDX41Q9UJV9 622 aaKnown RBP16.91■□□□□ 0.3
COL9A1-204ENST00000370496 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
COL9A1-204ENST00000370496 MOXD2PA6NHM9 499 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 SORBS3O60504 671 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 GGPS1O95749 300 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 MMP1P03956 469 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 TGFB3P10600 412 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 ICAM3P32942 547 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 RGS19P49795 217 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-204ENST00000370496 ARHGAP1Q07960 439 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 NPY5RQ15761 445 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 KRT40Q6A162 431 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 HSCBQ8IWL3 235 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 DHX37Q8IY37 1157 aaKnown RBP16.9■□□□□ 0.3
COL9A1-204ENST00000370496 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 TSEN34Q9BSV6 310 aaKnown RBP16.9■□□□□ 0.3
COL9A1-204ENST00000370496 HTATIP2Q9BUP3 242 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-204ENST00000370496 PHF24Q9UPV7 400 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
COL9A1-204ENST00000370496 UBIAD1Q9Y5Z9 338 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 ALPK3Q96L96 1907 aa16.9■□□□□ 0.3
COL9A1-204ENST00000370496 A0A1W2PQ45 241 aaPredicted RBP16.89■□□□□ 0.3
COL9A1-204ENST00000370496 A0A1W2PQY0 241 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.3
COL9A1-204ENST00000370496 ASGR1P07306 291 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 COL6A1P12109 1028 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 ITGB5P18084 799 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 ACLYP53396 1101 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 GUCY1B3Q02153 619 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 MLLT1Q03111 559 aaPredicted RBP16.89■□□□□ 0.3
COL9A1-204ENST00000370496 NONOQ15233 471 aaKnown RBP eCLIP16.89■□□□□ 0.3
COL9A1-204ENST00000370496 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.3
COL9A1-204ENST00000370496 KCNA10Q16322 511 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 CEP55Q53EZ4 464 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 TBCKQ8TEA7 893 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 FERMT2Q96AC1 680 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 MXRA8Q9BRK3 442 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 JADE2Q9NQC1 790 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 PKD2L1Q9P0L9 805 aa16.89■□□□□ 0.3
COL9A1-204ENST00000370496 SPATA31C2B4DYI2 1134 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 M0R2N6 131 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 CTAGE5O15320 804 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 MYL3P08590 195 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 NKX3-2P78367 333 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 SETQ01105 290 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-204ENST00000370496 SEMA3FQ13275 785 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 GNL2Q13823 731 aaKnown RBP16.89■□□□□ 0.29
COL9A1-204ENST00000370496 NEDD9Q14511 834 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 DIS3L2Q8IYB7 885 aaKnown RBP16.89■□□□□ 0.29
COL9A1-204ENST00000370496 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 EMID1Q96A84 441 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-204ENST00000370496 GLT1D1Q96MS3 346 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 MLXIPQ9HAP2 919 aa16.89■□□□□ 0.29
COL9A1-204ENST00000370496 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
COL9A1-204ENST00000370496 MMP3P08254 477 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 CYP3A4P08684 503 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 GJB2P29033 226 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-204ENST00000370496 NR5A1Q13285 461 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 LAMC2Q13753 1193 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 CELF3Q5SZQ8 465 aaKnown RBP16.88■□□□□ 0.29
COL9A1-204ENST00000370496 CCSAPQ6IQ19 270 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-204ENST00000370496 PIK3AP1Q6ZUJ8 805 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 GIMAP8Q8ND71 665 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-204ENST00000370496 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 CRYGNQ8WXF5 182 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 STARD7Q9NQZ5 370 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 POLR3EQ9NVU0 708 aa16.88■□□□□ 0.29
COL9A1-204ENST00000370496 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 MAFGO15525 162 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 SP2Q02086 613 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 SP4Q02446 784 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 INF2Q27J81 1249 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 CXCL17Q6UXB2 119 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 CYFIP1Q7L576 1253 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 NIPA1Q7RTP0 329 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 PPTC7Q8NI37 304 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 CYP2W1Q8TAV3 490 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 VTI1AQ96AJ9 217 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 SENP7Q9BQF6 1050 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 KCNH7Q9NS40 1196 aa16.87■□□□□ 0.29
COL9A1-204ENST00000370496 A6NJR5 290 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 CABYRO75952 493 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 KCNA2P16389 499 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 CUL4AQ13619 759 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 DGKDQ16760 1214 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 PRR16Q569H4 304 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 SNX21Q969T3 373 aa16.86■□□□□ 0.29
COL9A1-204ENST00000370496 SDF4Q9BRK5 362 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms