RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TRIM7Q9C029 511 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF304Q9HCX3 659 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 KCND1Q9NSA2 647 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CNTN3Q9P232 1028 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 MCM8Q9UJA3 840 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 GTF2A1LQ9UNN4 478 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 DDX60LQ5H9U9 1706 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 A0A1B0GUA9 196 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 FGRP09769 529 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 LACTBP83111 547 aaPredicted RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 DEUP1Q05D60 604 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 MCL1Q07820 350 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 NOL9Q5SY16 702 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ARMC4Q5T2S8 1044 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 GPATCH4Q5T3I0 446 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 DCAF8Q5TAQ9 597 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 RCSD1Q6JBY9 416 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 KIF6Q6ZMV9 814 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 GBP6Q6ZN66 633 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CATSPER4Q7RTX7 472 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 MIGA1Q8NAN2 632 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 PRR7Q8TB68 274 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 BICD2Q8TD16 824 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ZNF75CPQ92670 426 aaPredicted RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ZBTB10Q96DT7 871 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 BICD1Q96G01 975 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 TRMT2BQ96GJ1 504 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 SMAD5Q99717 465 aaKnown RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 BATF3Q9NR55 127 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 SMYD2Q9NRG4 433 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 EXOC1Q9NV70 894 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 GGA3Q9NZ52 723 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 CXXC1Q9P0U4 656 aaPredicted RBP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 OGDHLQ9ULD0 1010 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 NIP7Q9Y221 180 aaKnown RBP eCLIP5.66□□□□□ -1.5
UBE3D-202ENST00000369746 EMILIN1Q9Y6C2 1016 aa5.66□□□□□ -1.5
UBE3D-202ENST00000369746 ROBO3Q96MS0 1386 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 YDJCA8MPS7 323 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 ST18O60284 1047 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 FOXD2O60548 495 aaPredicted RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 PGRP06401 933 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 HOXB7P09629 217 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 USP17L8P0C7I0 530 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 C21orf62-AS1Q17RA5 79 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 TTC39AQ5SRH9 613 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 C6orf118Q5T5N4 469 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 NAIF1Q69YI7 327 aaPredicted RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 C17orf99Q6UX52 265 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 FAM47EQ6ZV65 393 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 USP6NLQ92738 828 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 RNF34Q969K3 372 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 ATP6V1E2Q96A05 226 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 SLC10A4Q96EP9 437 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 THOC1Q96FV9 657 aaKnown RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 UIMC1Q96RL1 719 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 CAPS2Q9BXY5 557 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 MYOZ2Q9NPC6 264 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 GPHNQ9NQX3 736 aaPredicted RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 ARGLU1Q9NWB6 273 aaPredicted RBP5.65□□□□□ -1.5
UBE3D-202ENST00000369746 FBXO10Q9UK96 956 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 MKL2Q9ULH7 1088 aa5.65□□□□□ -1.5
UBE3D-202ENST00000369746 PSMD14O00487 310 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 MUSKO15146 869 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 ERLIN1O75477 346 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 IFIT2P09913 472 aaKnown RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 ATF7P17544 494 aaPredicted RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 GRK4P32298 578 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 SEPHS1P49903 392 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 ST13P50502 369 aaKnown RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 RENBPP51606 427 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 PPIL2Q13356 520 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 SCARF1Q14162 830 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 AOC3Q16853 763 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 FAM180BQ6P0A1 224 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 SMIM5Q71RC9 77 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 MAFAQ8NHW3 353 aaPredicted RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 MAGEC3Q8TD91 643 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 SP7Q8TDD2 431 aaPredicted RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 FAM163AQ96GL9 167 aaPredicted RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 LCMT1Q9UIC8 334 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 FHOD1Q9Y613 1164 aa5.65□□□□□ -1.51
UBE3D-202ENST00000369746 MYBBP1AQ9BQG0 1328 aaKnown RBP5.65□□□□□ -1.51
UBE3D-202ENST00000369746 SOX1O00570 391 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 KRT10P13645 584 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 RAC2P15153 192 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 NLRP12P59046 1061 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 CHMP4BP1P59074 171 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 MRPS5P82675 430 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PUM3Q15397 648 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 FAM133BQ5BKY9 247 aaKnown RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 WLSQ5T9L3 541 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 TTC19Q6DKK2 380 aaPredicted RBP5.64□□□□□ -1.51
UBE3D-202ENST00000369746 PLBD1Q6P4A8 553 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 BRAPQ7Z569 592 aa5.64□□□□□ -1.51
UBE3D-202ENST00000369746 APLFQ8IW19 511 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms