RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 hCG_1984214I3L0E3 225 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 B4GALT4O60513 344 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 RAG1P15918 1043 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 UBA1P22314 1058 aaKnown RBP23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 PDIA3P30101 505 aaKnown RBP23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 FGD1P98174 961 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 NBPF20Q3BBV1 942 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 NFRKBQ6P4R8 1299 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 ZNF713Q8N859 430 aaPredicted RBP23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 TRPV6Q9H1D0 765 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 BARHL2Q9NY43 387 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 LAMA2P24043 3122 aaKnown RBP23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 TLR3O15455 904 aaKnown RBP23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 PKN1Q16512 942 aa23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 UBE2SQ16763 222 aa23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 PFKFB3Q16875 520 aaPredicted RBP23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 MFSD5Q6N075 450 aa23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 BCAS3Q9H6U6 928 aa23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 RIC8AQ9NPQ8 531 aa23.61■■□□□ 1.37
SMNDC1-201ENST00000369592 PTPN11Q06124 597 aaPredicted RBP23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 SHHQ15465 462 aa23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 C9orf50Q5SZB4 431 aa23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 SESTD1Q86VW0 696 aa23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 DHX37Q8IY37 1157 aaKnown RBP23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 CYP46A1Q9Y6A2 500 aa23.6■■□□□ 1.37
SMNDC1-201ENST00000369592 HAS3O00219 553 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 PRPF3O43395 683 aaKnown RBP23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 GGPS1O95749 300 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 CLK2P49760 499 aaKnown RBP23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 DGKDQ16760 1214 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 HSDL1Q3SXM5 330 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 NOC4LQ9BVI4 516 aaKnown RBP23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 UPF3BQ9BZI7 483 aaKnown RBP23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 PCDHA6Q9UN73 950 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 PCDHA8Q9Y5H6 950 aa23.59■■□□□ 1.37
SMNDC1-201ENST00000369592 FIBPO43427 364 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 PPFIA4O75335 1185 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 F2P00734 622 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 IFNAR1P17181 557 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 ANAPC15P60006 121 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 GNPTABQ3T906 1256 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 C16orf59Q7L2K0 433 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 ZNF274Q96GC6 653 aaPredicted RBP23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 CTAGE1Q96RT6 745 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 SENP7Q9BQF6 1050 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 TRMT13Q9NUP7 481 aaKnown RBP23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 RTEL1Q9NZ71 1219 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 UBIAD1Q9Y5Z9 338 aa23.58■■□□□ 1.37
SMNDC1-201ENST00000369592 ESYT2A0FGR8 921 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 SCG2P13521 617 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 ITGB5P18084 799 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 NAPAP54920 295 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 FPGSQ05932 587 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 VWCEQ96DN2 955 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 UMODL1Q5DID0 1318 aa23.57■■□□□ 1.36
SMNDC1-201ENST00000369592 METTL7BQ6UX53 244 aa23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 GPRASP2Q96D09 838 aa23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 C16orf70Q9BSU1 422 aa23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 RNF26Q9BY78 433 aaPredicted RBP23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 HIPK3Q9H422 1215 aa23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 TRIP12Q14669 1992 aaPredicted RBP23.56■■□□□ 1.36
SMNDC1-201ENST00000369592 SMCO2A6NFE2 343 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 ADAMTS3O15072 1205 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 SEC24BO95487 1268 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 FOSP01100 380 aaPredicted RBP23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 SUPT20HL2P0C7V6 817 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 CYP2C18P33260 490 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 ADCY7P51828 1080 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 NEDD9Q14511 834 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 PPP1R13LQ8WUF5 828 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 CRYGNQ8WXF5 182 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 SPATA33Q96N06 139 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 ZMYND12Q9H0C1 365 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 GLT8D2Q9H1C3 349 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 WNT8AQ9H1J5 351 aa23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 NCOA5Q9HCD5 579 aaKnown RBP23.55■■□□□ 1.36
SMNDC1-201ENST00000369592 SPDYE3A6NKU9 549 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 CSF2RAP15509 400 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 KCNA2P16389 499 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 PHKBQ93100 1093 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 PPP1R12CQ9BZL4 782 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 PDRG1Q9NUG6 133 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 TELO2Q9Y4R8 837 aa23.54■■□□□ 1.36
SMNDC1-201ENST00000369592 ATP9AO75110 1047 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 PSEN2P49810 448 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 CCT2P78371 535 aaKnown RBP23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 AP3B2Q13367 1082 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 PPIGQ13427 754 aaKnown RBP eCLIP23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 TMEM240Q5SV17 173 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 NLRX1Q86UT6 975 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 TMEM199Q8N511 208 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 GPR20Q99678 358 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 JADE2Q9NQC1 790 aa23.53■■□□□ 1.36
SMNDC1-201ENST00000369592 ZNF286BP0CG31 522 aa23.52■■□□□ 1.36
SMNDC1-201ENST00000369592 CYP2C9P11712 490 aa23.52■■□□□ 1.36
SMNDC1-201ENST00000369592 HOXC8P31273 242 aa23.52■■□□□ 1.36
SMNDC1-201ENST00000369592 SREBF1P36956 1147 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms