RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 MYOCDQ8IZQ8 938 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 CCDC102AQ96A19 550 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 IFIH1Q9BYX4 1025 aaKnown RBP12.77□□□□□ -0.36
RAB39B-201ENST00000369454 SPATA31A6Q5VVP1 1343 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 BUB1O43683 1085 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 AMPD2Q01433 879 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 PABPC4Q13310 644 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAB39B-201ENST00000369454 FAM26FQ5R3K3 315 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 NUP58Q9BVL2 599 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 BCAS3Q9H6U6 928 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.37
RAB39B-201ENST00000369454 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 CDK5RAP2Q96SN8 1893 aa12.77□□□□□ -0.37
RAB39B-201ENST00000369454 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 CHRNA5P30532 468 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 NT5C2P49902 561 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 UBXN2AP68543 259 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 ICA1Q05084 483 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 TSG101Q99816 390 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 ZNF831Q5JPB2 1677 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 PSMC6P62333 389 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 ZYXQ15942 572 aaKnown RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 PTPROQ16827 1216 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 CYP2W1Q8TAV3 490 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 ANO3Q9BYT9 981 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 NPR1P16066 1061 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 KIF11P52732 1056 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 MEA1Q16626 185 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 BEND6Q5SZJ8 279 aaPredicted RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 SECISBP2LQ93073 1101 aaKnown RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 P2RX7Q99572 595 aaKnown RBP12.76□□□□□ -0.37
RAB39B-201ENST00000369454 VPS18Q9P253 973 aa12.76□□□□□ -0.37
RAB39B-201ENST00000369454 NCK2O43639 380 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 MED24O75448 989 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 APBA3O96018 575 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 FAM193AP78312 1265 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 PDIA5Q14554 519 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 DNAAF5Q86Y56 855 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 MYO1AQ9UBC5 1043 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 F5H6K3 240 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 ERLIN1O75477 346 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 KIF20AO95235 890 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 NOVP48745 357 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 RASSF7Q02833 373 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 KLRC3Q07444 240 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 BRD3Q15059 726 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 AOC3Q16853 763 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 KCTD19Q17RG1 926 aaPredicted RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 DNAJC19Q96DA6 116 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 ERGIC2Q96RQ1 377 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 PDE2AO00408 941 aaPredicted RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 CHMP2AO43633 222 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 GH2P01242 217 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
RAB39B-201ENST00000369454 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 PCDHA13Q9Y5I0 950 aa12.75□□□□□ -0.37
RAB39B-201ENST00000369454 ADAMTSL1Q8N6G6 1762 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 hCG_1984214I3L0E3 225 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 PSMD14O00487 310 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 EPS15P42566 896 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 JAG1P78504 1218 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 NLGN1Q8N2Q7 840 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 ZNF713Q8N859 430 aaPredicted RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 ZNF76P36508 570 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 LMAN1P49257 510 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 CASP5P51878 434 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
RAB39B-201ENST00000369454 ECE2O60344 883 aa12.74□□□□□ -0.37
RAB39B-201ENST00000369454 MAGEA1P43355 309 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms