RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CACNA1SQ13698 1873 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 KLRC4O43908 158 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 UFL1O94874 794 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 COPB2P35606 906 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 RBM5P52756 815 aaKnown RBP eCLIP9.82□□□□□ -0.84
THBS3-201ENST00000368378 UBXN2AP68543 259 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 AMPD2Q01433 879 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 ODF2Q5BJF6 829 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 REXO1Q8N1G1 1221 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 TBC1D5Q92609 795 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 NDST4Q9H3R1 872 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 PKD2L1Q9P0L9 805 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 ARPP21Q9UBL0 812 aaPredicted RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 ATF5Q9Y2D1 282 aaPredicted RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 SEMA3EO15041 775 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 CHMP2AO43633 222 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 ORC4O43929 436 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 ZBTB7AO95365 584 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 FAM153BP0C7A2 387 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 PAFAH1B1P43034 410 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 CARSP49589 748 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 GUCY1A3Q02108 690 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 FAM153CQ494X1 144 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 HERC4Q5GLZ8 1057 aaPredicted RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 TSEN2Q8NCE0 465 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 MTMR8Q96EF0 704 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 CCDC51Q96ER9 411 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 CCDC43Q96MW1 224 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 LSM14BQ9BX40 385 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 PPANQ9NQ55 473 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 ATP8A2Q9NTI2 1148 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 GEMIN8Q9NWZ8 242 aaKnown RBP9.82□□□□□ -0.84
THBS3-201ENST00000368378 FAM153AQ9UHL3 310 aa9.82□□□□□ -0.84
THBS3-201ENST00000368378 POTEB2H3BUK9 544 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 SEC24CP53992 1094 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 NEK8Q86SG6 692 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 FAM71BQ8TC56 605 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 DDX12PQ92771 950 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 SH2D3AQ9BRG2 576 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 CAPN11Q9UMQ6 739 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 G3V3G9 751 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 STXBP3O00186 592 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 CLIC2O15247 247 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 TRAPPC10P48553 1259 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
THBS3-201ENST00000368378 MFSD14BQ5SR56 506 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 DPP8Q6V1X1 898 aaPredicted RBP9.81□□□□□ -0.84
THBS3-201ENST00000368378 ARMCX6Q7L4S7 300 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 PROM2Q8N271 834 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 MSANTD4Q8NCY6 345 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 SPATA4Q8NEY3 305 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 ELMO3Q96BJ8 720 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 ITIH6Q6UXX5 1313 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 CENPFP49454 3210 aa9.81□□□□□ -0.84
THBS3-201ENST00000368378 ATP8B1O43520 1251 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 PALMO75781 387 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 ABCB4P21439 1286 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 CCNE1P24864 410 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 BAG6P46379 1132 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 GTF2IP78347 998 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 KIAA0753Q2KHM9 967 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 PACS2Q86VP3 889 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 C4orf32Q8N8J7 132 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 OSBPL9Q96SU4 736 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 C6orf50Q9HD87 102 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 LRRC10BA6NIK2 292 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 NDUFAB1O14561 156 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 KCNK3O14649 394 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 HEXIM1O94992 359 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 FGRP09769 529 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 CDK8P49336 464 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 GIMAP8Q8ND71 665 aaPredicted RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 LARP4BQ92615 738 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 ALS2CR12Q96Q35 445 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 BRWD3Q6RI45 1802 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 POTEB3A0JP26 581 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 POTECB2RU33 542 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 SRGNP10124 158 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 PCP11498 1178 aaKnown RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 GTF2A1P52655 376 aaPredicted RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 ZBED6P86452 979 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
THBS3-201ENST00000368378 ECM1Q16610 540 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 TTC31Q49AM3 519 aaPredicted RBP9.8□□□□□ -0.84
THBS3-201ENST00000368378 C12orf60Q5U649 245 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 KRT79Q5XKE5 535 aa9.8□□□□□ -0.84
THBS3-201ENST00000368378 ARL6IP4Q66PJ3 421 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms