RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 SF3B2Q13435 895 aaKnown RBP22.12■■□□□ 1.13
PHLDA3-202ENST00000367311 PARP10Q53GL7 1025 aa22.12■■□□□ 1.13
PHLDA3-202ENST00000367311 EMBQ6PCB8 327 aa22.12■■□□□ 1.13
PHLDA3-202ENST00000367311 YTHDF3Q7Z739 585 aaKnown RBP22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 KLHL7Q8IXQ5 586 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 CCDC13Q8IYE1 715 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 ARPP21Q9UBL0 812 aaPredicted RBP22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 CCDC189A1A4V9 331 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 BACH1O14867 736 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 TLR2O60603 784 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 SMTNP53814 917 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 IFT88Q13099 833 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 CENPPQ6IPU0 288 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 FBXO33Q7Z6M2 555 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 OR2W6PQ8NHA6 318 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 PIK3R5Q8WYR1 880 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 CCDC47Q96A33 483 aaKnown RBP22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 MIEF2Q96C03 454 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 BSDC1Q9NW68 430 aaPredicted RBP22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 ODF2LQ9ULJ1 636 aa22.11■■□□□ 1.13
PHLDA3-202ENST00000367311 SLC37A4O43826 429 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 TCP1P17987 556 aaKnown RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 CDK17Q00537 523 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 EHHADHQ08426 723 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 HGSNATQ68CP4 663 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 DZIP1Q86YF9 867 aaKnown RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 MAPKAPK5Q8IW41 473 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 CASKIN2Q8WXE0 1202 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 PNMA5Q96PV4 448 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 SH3GLB2Q9NR46 395 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 ATP8A2Q9NTI2 1148 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 LOC102724428A0A0B4J2F2 783 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 RASSF9O75901 435 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 TDP2O95551 362 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 HIBADHP31937 336 aaKnown RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 SIK1P57059 783 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 CEP85LQ5SZL2 805 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 CNNM4Q6P4Q7 775 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 KDM7AQ6ZMT4 941 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 VEZTQ9HBM0 779 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 PCP11498 1178 aaKnown RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 KLRC1P26715 233 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 HPDP32754 393 aaPredicted RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 HDLBPQ00341 1268 aaKnown RBP22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 C12orf60Q5U649 245 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 PIGSQ96S52 555 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 CCT8L2Q96SF2 557 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
PHLDA3-202ENST00000367311 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 HNRNPH3P31942 346 aaKnown RBP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 NONOQ15233 471 aaKnown RBP eCLIP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 ECM1Q16610 540 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 FIGNQ5HY92 759 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 PDXDC1Q6P996 788 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 NELFCDQ8IXH7 590 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 CAVIN3Q969G5 261 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 SLC40A1Q9NP59 571 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 PPP1R37O75864 691 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 PTGISQ16647 500 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 MAN2A1Q16706 1144 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 ASTE1Q2TB18 679 aaPredicted RBP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 CFAP58Q5T655 872 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 SV2BQ7L1I2 683 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 ZNF572Q7Z3I7 529 aaPredicted RBP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 DDX42Q86XP3 938 aaKnown RBP eCLIP22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 RUBCNQ92622 972 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 NOX5Q96PH1 765 aa22.09■■□□□ 1.13
PHLDA3-202ENST00000367311 POLR2FP61218 127 aaKnown RBP22.08■■□□□ 1.13
PHLDA3-202ENST00000367311 NLRP14Q86W24 1093 aa22.08■■□□□ 1.13
PHLDA3-202ENST00000367311 MYCBPAPQ8TBZ2 947 aa22.08■■□□□ 1.13
PHLDA3-202ENST00000367311 FRMPD2Q68DX3 1309 aaPredicted RBP22.08■■□□□ 1.13
PHLDA3-202ENST00000367311 SSBP05455 408 aaKnown RBP eCLIP22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 MYL1P05976 194 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 LRRC55Q6ZSA7 311 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 NEK8Q86SG6 692 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 DGKHQ86XP1 1220 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 CEP57Q86XR8 500 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 TBC1D5Q92609 795 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 COA7Q96BR5 231 aa22.08■■□□□ 1.12
PHLDA3-202ENST00000367311 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 CDR1P51861 262 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 CALML4Q96GE6 196 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 LSM14BQ9BX40 385 aaKnown RBP22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 NOL4O94818 638 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 NR1D1P20393 614 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 SATB1Q01826 763 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 ITIH3Q06033 890 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 SF3A3Q12874 501 aaKnown RBP eCLIP22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 WLSQ5T9L3 541 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 ZNF444Q8N0Y2 327 aaPredicted RBP22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 DDX12PQ92771 950 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 MYH1P12882 1939 aa22.07■■□□□ 1.12
PHLDA3-202ENST00000367311 NPHP3-ACAD11A0A0J9YXS1 232 aa22.06■■□□□ 1.12
PHLDA3-202ENST00000367311 PALM3A6NDB9 673 aaPredicted RBP22.06■■□□□ 1.12
PHLDA3-202ENST00000367311 RAD51CO43502 376 aa22.06■■□□□ 1.12
PHLDA3-202ENST00000367311 ECM2O94769 699 aaPredicted RBP22.06■■□□□ 1.12
PHLDA3-202ENST00000367311 LCA5LO95447 670 aa22.06■■□□□ 1.12
PHLDA3-202ENST00000367311 PRPHP41219 470 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms