RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ATRNO75882 1429 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PNMA6FA0A0J9YX94 578 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 STAT1P42224 750 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NCAPH2Q6IBW4 605 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 BARGINQ6ZT62 677 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 VSIG1Q86XK7 387 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 VIPAS39Q9H9C1 493 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM207AQ9NSI2 230 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARMCX3Q9UH62 379 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PLCG1P19174 1290 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PRCPP42785 496 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 GRIPAP1Q4V328 841 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 DCAF17Q5H9S7 520 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 FBXO11Q86XK2 927 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 PSD3Q9NYI0 1048 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 MROH7-TTC4A0A0A0MT08 1334 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 STMN1P16949 149 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 NCAPHQ15003 741 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SEL1L2Q5TEA6 688 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 ALS2CLQ60I27 953 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 SRBD1Q8N5C6 995 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 GSDMBQ8TAX9 411 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 FAM81BQ96LP2 452 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 ZNF335Q9H4Z2 1342 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-204ENST00000366767 MAGEA9P43362 315 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ADAM9Q13443 819 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SEC23AQ15436 765 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 GPBP1Q86WP2 473 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 REXO1L1PQ8IX06 675 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 UBL4BQ8N7F7 174 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC97Q96F63 343 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 AMNQ9BXJ7 453 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SLC39A2Q9NP94 309 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 GUCY1A2P33402 732 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 TOGARAM2Q6ZUX3 1019 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SND1Q7KZF4 910 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 FOXP4Q8IVH2 680 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SMYD4Q8IYR2 804 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ADSSL1Q8N142 457 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC63Q8NA47 563 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 MPHOSPH6Q99547 160 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 TSC22D3Q99576 134 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 AMFRQ9UKV5 643 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 JAG2Q9Y219 1238 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 COL5A2P05997 1499 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CEP104O60308 925 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ABCD1P33897 745 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP4CP60510 307 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 MMS22LQ6ZRQ5 1243 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 MRPL11Q9Y3B7 192 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PCDHA13Q9Y5I0 950 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ABCB11O95342 1321 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 MED1Q15648 1581 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCT5P48643 541 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 POLE2P56282 527 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CERKLQ49MI3 558 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PCDHA6Q9UN73 950 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PCDHA8Q9Y5H6 950 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 LMO7Q8WWI1 1683 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP17L8P0C7I0 530 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 POLR2FP61218 127 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ZNF710Q8N1W2 664 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPANQ9NQ55 473 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SERPINB13Q9UIV8 391 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SAMM50Q9Y512 469 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 AFPP02771 609 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ANXA13P27216 316 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARID5AQ03989 594 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CASP8Q14790 479 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 E2F5Q15329 346 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 EMBQ6PCB8 327 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 TAOK1Q7L7X3 1001 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 NLGN1Q8N2Q7 840 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.86□□□□□ -1.472e-6■■■■■ 54.4
CDC42BPA-204ENST00000366767 SAAL1Q96ER3 474 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 KANSL2Q9H9L4 492 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CNTNAP5Q8WYK1 1306 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ESYT2A0FGR8 921 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARHGEF35A5YM69 484 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 H2AFZP0C0S5 128 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 GOLGA8HP0CJ92 632 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SRGNP10124 158 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 FMR1Q06787 632 aaKnown RBP eCLIP5.86□□□□□ -1.471e-6■■■■□ 20
CDC42BPA-204ENST00000366767 CALCOCO2Q13137 446 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 PHLDB3Q6NSJ2 640 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC62Q6P9F0 684 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 H2AFVQ71UI9 128 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 MRPL44Q9H9J2 332 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CD209Q9NNX6 404 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 CEP72Q9P209 647 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 USP21Q9UK80 565 aa5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-204ENST00000366767 SPATA31A1Q5TZJ5 1347 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 CNTNAP4Q9C0A0 1308 aa5.85□□□□□ -1.47
CDC42BPA-204ENST00000366767 CACNA1FO60840 1977 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms