RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ARRDC4Q8NCT1 418 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 RNF38Q9H0F5 515 aa6.97□□□□□ -1.29
RNU4-28P-201ENST00000364739 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 HGSO14964 777 aaPredicted RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 DGKIO75912 1065 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 C8BP07358 591 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 SLC6A11P48066 632 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 CACNB2Q08289 660 aaPredicted RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 RSPO2Q6UXX9 243 aaPredicted RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 PIP4K2CQ8TBX8 421 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 FNIP1Q8TF40 1166 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 IPO9Q96P70 1041 aaKnown RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 DHRS4Q9BTZ2 278 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 OSBPL2Q9H1P3 480 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 CDK11AQ9UQ88 783 aaPredicted RBP6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 PMF1-BGLAPU3KQ54 211 aa6.96□□□□□ -1.3
RNU4-28P-201ENST00000364739 GPR85P60893 370 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 SMAD4Q13485 552 aaKnown RBP6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 LRP10Q7Z4F1 713 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZNF526Q8TF50 670 aaPredicted RBP6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 MKL1Q969V6 931 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 EPB41L1Q9H4G0 881 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 PCDHA8Q9Y5H6 950 aa6.95□□□□□ -1.3
RNU4-28P-201ENST00000364739 TCRBV5S2A0A599 114 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 FFAR3O14843 346 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 SLC27A2O14975 620 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 NKRFO15226 690 aaKnown RBP eCLIP6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 TRIM13O60858 407 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 TADA3O75528 432 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 SOD2P04179 222 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 GRK2P25098 689 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 GRK3P35626 688 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 CPA5Q8WXQ8 436 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 GORASP1Q9BQQ3 440 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 IPPKQ9H8X2 491 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 PCDHA9Q9Y5H5 950 aa6.94□□□□□ -1.3
RNU4-28P-201ENST00000364739 LTFP02788 710 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 SUMO1P63165 101 aaKnown RBP6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 GRIN1Q05586 938 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 KIZQ2M2Z5 673 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 CCDC144BQ3MJ40 725 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 TMEM151BQ8IW70 566 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 SYT8Q8NBV8 401 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 PTPRN2Q92932 1015 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 KISS1RQ969F8 398 aaPredicted RBP6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
RNU4-28P-201ENST00000364739 SRGAP2CP0DJJ0 459 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 HTRA3P83110 453 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 VWA3BQ502W6 1294 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 EMC4Q5J8M3 183 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 OTOP3Q7RTS5 596 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 MTDHQ86UE4 582 aaKnown RBP6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 MIB1Q86YT6 1006 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 NLGN1Q8N2Q7 840 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 CLEC4DQ8WXI8 215 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZFYVE21Q9BQ24 234 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 YIPF4Q9BSR8 244 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 SLC6A20Q9NP91 592 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 MYOTQ9UBF9 498 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 RBPJLQ9UBG7 517 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
RNU4-28P-201ENST00000364739 CYP2C8P10632 490 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 GNAT1P11488 350 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 GUCY1A3Q02108 690 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 DLX2Q07687 328 aaPredicted RBP6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 CHRNA2Q15822 529 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 FAM126BQ8IXS8 530 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 SMOC1Q9H4F8 434 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 PIF1Q9H611 641 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 SPATA6Q9NWH7 488 aaPredicted RBP6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 NDOR1Q9UHB4 597 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 PTCH2Q9Y6C5 1203 aa6.91□□□□□ -1.3
RNU4-28P-201ENST00000364739 CRTAMO95727 393 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 LRG1P02750 347 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 INHBBP09529 407 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 BUD31P41223 144 aaPredicted RBP6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 LONRF2Q1L5Z9 754 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 FEZF2Q8TBJ5 459 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 THAP3Q8WTV1 239 aaPredicted RBP6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 UBXN4Q92575 508 aa6.9□□□□□ -1.3
RNU4-28P-201ENST00000364739 ALG1Q9BT22 464 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms