RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 LONP2Q86WA8 852 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 SNRNP27Q8WVK2 155 aaKnown RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 WDR60Q8WVS4 1066 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ESF1Q9H501 851 aaKnown RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 RHBDL2Q9NX52 303 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 IL1RAPL1Q9NZN1 696 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 USP15Q9Y4E8 981 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 TTC26A0AVF1 554 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 BACH1O14867 736 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 SNX3O60493 162 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 PEX11AO75192 247 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 GFPT2O94808 682 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 SUN1O94901 812 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 MMEP08473 750 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 MYBP10242 640 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 CCDC65Q8IXS2 484 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 ZNF333Q96JL9 665 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 NAP1L3Q99457 506 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-203ENST00000361528 CENPKQ9BS16 269 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 RXFP1Q9HBX9 757 aa12.66□□□□□ -0.38
CNOT4-203ENST00000361528 LAMA4Q16363 1823 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 MACROD2A1Z1Q3 448 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 NVLO15381 856 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TJP3O95049 919 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 ASLP04424 464 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 KCNA3P22001 575 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 CCT6AP40227 531 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 OCRLQ01968 901 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 SPA17Q15506 151 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TBC1D9BQ66K14 1250 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 AGGF1Q8N302 714 aaeCLIP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 ARL10Q8N8L6 244 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 OLFM3Q96PB7 478 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 GSDMAQ96QA5 445 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 STOML1Q9UBI4 398 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 NKX1-2Q9UD57 310 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 IPO5O00410 1097 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 SART1O43290 800 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 HNRNPCP07910 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 CDC25AP30304 524 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 VHLP40337 213 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 PTDSS1P48651 473 aaKnown RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TNNC1P63316 161 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 UAP1Q16222 522 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 LRRC34Q8IZ02 419 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 GATA6Q92908 595 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 CLMNQ96JQ2 1002 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 NACA2Q9H009 215 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 TBCCD1Q9NVR7 557 aa12.65□□□□□ -0.38
CNOT4-203ENST00000361528 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.39
CNOT4-203ENST00000361528 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 RAD21O60216 631 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 MLH1P40692 756 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 MMP13P45452 471 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 MCMDC2Q4G0Z9 681 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 TCP11X2Q5H9J9 407 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 NFRKBQ6P4R8 1299 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 TMEM237Q96Q45 408 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 COL15A1P39059 1388 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 GOLGA8AA7E2F4 631 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 PPP1R3GB7ZBB8 358 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 POLR2DO15514 142 aaKnown RBP12.64□□□□□ -0.39
CNOT4-203ENST00000361528 GJB6O95452 261 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 UBXN1Q04323 297 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 DAB2IPQ5VWQ8 1189 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 CROCCP2Q86T23 111 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 RWDD2AQ9UIY3 292 aa12.64□□□□□ -0.39
CNOT4-203ENST00000361528 TMEM247A6NEH6 219 aa12.63□□□□□ -0.39
CNOT4-203ENST00000361528 SIGLEC16A6NMB1 481 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms